Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SOX6P35712 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SOX6P35712 AL596275.1-201ENST00000423464 877 ntBASIC15.18■□□□□ 0.02
SOX6P35712 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SOX6P35712 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SOX6P35712 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SOX6P35712 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.18■□□□□ 0.02
SOX6P35712 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SOX6P35712 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SOX6P35712 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SOX6P35712 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SOX6P35712 AC113404.2-201ENST00000507884 177 ntBASIC15.18■□□□□ 0.02
SOX6P35712 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.18■□□□□ 0.02
SOX6P35712 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.18■□□□□ 0.02
SOX6P35712 SLC25A1P4-201ENST00000567977 778 ntBASIC15.18■□□□□ 0.02
SOX6P35712 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
SOX6P35712 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.18■□□□□ 0.02
SOX6P35712 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
SOX6P35712 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.18■□□□□ 0.02
SOX6P35712 CR769767.2-201ENST00000622735 460 ntBASIC15.18■□□□□ 0.02
SOX6P35712 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SOX6P35712 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.18■□□□□ 0.02
SOX6P35712 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SOX6P35712 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
SOX6P35712 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.18■□□□□ 0.02
SOX6P35712 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SOX6P35712 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SOX6P35712 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SOX6P35712 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SOX6P35712 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SOX6P35712 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SOX6P35712 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SOX6P35712 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SOX6P35712 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SOX6P35712 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SOX6P35712 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
SOX6P35712 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SOX6P35712 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.17■□□□□ 0.02
SOX6P35712 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SOX6P35712 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SOX6P35712 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SOX6P35712 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SOX6P35712 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SOX6P35712 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SOX6P35712 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SOX6P35712 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SOX6P35712 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SOX6P35712 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.17■□□□□ 0.02
SOX6P35712 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SOX6P35712 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SOX6P35712 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.17■□□□□ 0.02
SOX6P35712 EGFEM1P-202ENST00000431685 1563 ntBASIC15.17■□□□□ 0.02
SOX6P35712 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SOX6P35712 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.17■□□□□ 0.02
SOX6P35712 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.17■□□□□ 0.02
SOX6P35712 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.17■□□□□ 0.02
SOX6P35712 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.17■□□□□ 0.02
SOX6P35712 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.17■□□□□ 0.02
SOX6P35712 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SOX6P35712 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.17■□□□□ 0.02
SOX6P35712 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SOX6P35712 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.17■□□□□ 0.02
SOX6P35712 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SOX6P35712 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SOX6P35712 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SOX6P35712 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SOX6P35712 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SOX6P35712 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SOX6P35712 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SOX6P35712 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SOX6P35712 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SOX6P35712 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
SOX6P35712 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SOX6P35712 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SOX6P35712 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SOX6P35712 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SOX6P35712 C8orf49-201ENST00000525043 1968 ntBASIC15.16■□□□□ 0.02
SOX6P35712 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SOX6P35712 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SOX6P35712 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SOX6P35712 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SOX6P35712 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.16■□□□□ 0.02
SOX6P35712 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SOX6P35712 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SOX6P35712 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SOX6P35712 MESTP1-201ENST00000404287 994 ntBASIC15.16■□□□□ 0.02
SOX6P35712 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.16■□□□□ 0.02
SOX6P35712 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.16■□□□□ 0.02
SOX6P35712 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
SOX6P35712 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.16■□□□□ 0.02
SOX6P35712 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.16■□□□□ 0.02
SOX6P35712 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SOX6P35712 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.16■□□□□ 0.02
SOX6P35712 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SOX6P35712 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.16■□□□□ 0.02
SOX6P35712 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.16■□□□□ 0.02
SOX6P35712 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.16■□□□□ 0.02
SOX6P35712 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.16■□□□□ 0.02
SOX6P35712 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SOX6P35712 FAM45BP-202ENST00000592932 1624 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms