Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT9P35527 AL020989.1-201ENST00000422979 469 ntBASIC18.47■□□□□ 0.55
KRT9P35527 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.47■□□□□ 0.55
KRT9P35527 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.47■□□□□ 0.55
KRT9P35527 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.47■□□□□ 0.55
KRT9P35527 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.47■□□□□ 0.55
KRT9P35527 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.47■□□□□ 0.55
KRT9P35527 AL121772.3-201ENST00000610840 674 ntBASIC18.47■□□□□ 0.55
KRT9P35527 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRT9P35527 AC007950.2-201ENST00000615045 2347 ntBASIC18.47■□□□□ 0.55
KRT9P35527 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.47■□□□□ 0.55
KRT9P35527 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRT9P35527 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRT9P35527 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRT9P35527 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
KRT9P35527 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
KRT9P35527 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
KRT9P35527 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KRT9P35527 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT9P35527 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT9P35527 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT9P35527 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.46■□□□□ 0.55
KRT9P35527 AC148477.5-201ENST00000625164 1645 ntBASIC18.46■□□□□ 0.55
KRT9P35527 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT9P35527 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
KRT9P35527 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT9P35527 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
KRT9P35527 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
KRT9P35527 SIGLEC30P-201ENST00000455569 941 ntBASIC18.46■□□□□ 0.55
KRT9P35527 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KRT9P35527 PRELID1P1-202ENST00000567272 903 ntBASIC18.46■□□□□ 0.55
KRT9P35527 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.46■□□□□ 0.55
KRT9P35527 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.46■□□□□ 0.55
KRT9P35527 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.46■□□□□ 0.55
KRT9P35527 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT9P35527 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.46■□□□□ 0.55
KRT9P35527 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT9P35527 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.46■□□□□ 0.55
KRT9P35527 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.46■□□□□ 0.55
KRT9P35527 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
KRT9P35527 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT9P35527 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.46■□□□□ 0.55
KRT9P35527 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.46■□□□□ 0.55
KRT9P35527 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
KRT9P35527 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
KRT9P35527 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT9P35527 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT9P35527 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
KRT9P35527 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT9P35527 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT9P35527 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
KRT9P35527 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT9P35527 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
KRT9P35527 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT9P35527 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.45■□□□□ 0.54
KRT9P35527 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT9P35527 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.45■□□□□ 0.54
KRT9P35527 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRT9P35527 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT9P35527 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRT9P35527 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT9P35527 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.45■□□□□ 0.54
KRT9P35527 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRT9P35527 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT9P35527 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRT9P35527 ACTG1P4-201ENST00000425123 1122 ntBASIC18.45■□□□□ 0.54
KRT9P35527 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.45■□□□□ 0.54
KRT9P35527 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
KRT9P35527 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.45■□□□□ 0.54
KRT9P35527 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.45■□□□□ 0.54
KRT9P35527 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
KRT9P35527 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT9P35527 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.45■□□□□ 0.54
KRT9P35527 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT9P35527 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.45■□□□□ 0.54
KRT9P35527 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT9P35527 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT9P35527 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.45■□□□□ 0.54
KRT9P35527 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT9P35527 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRT9P35527 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.45■□□□□ 0.54
KRT9P35527 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
KRT9P35527 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
KRT9P35527 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT9P35527 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.44■□□□□ 0.54
KRT9P35527 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.44■□□□□ 0.54
KRT9P35527 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRT9P35527 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT9P35527 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT9P35527 AC022188.1-201ENST00000620960 1664 ntBASIC18.44■□□□□ 0.54
KRT9P35527 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT9P35527 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT9P35527 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRT9P35527 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT9P35527 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
KRT9P35527 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRT9P35527 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.44■□□□□ 0.54
KRT9P35527 AP005117.1-201ENST00000584346 1413 ntBASIC18.44■□□□□ 0.54
KRT9P35527 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT9P35527 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms