Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 PCED1CP-201ENST00000419887 785 ntBASIC15.7■□□□□ 0.1
TNFRSF1BP20333 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 AC114341.1-201ENST00000618070 349 ntBASIC15.7■□□□□ 0.1
TNFRSF1BP20333 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 AP000867.3-201ENST00000524675 377 ntBASIC15.69■□□□□ 0.1
TNFRSF1BP20333 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 AL049597.2-201ENST00000565575 961 ntBASIC15.69■□□□□ 0.1
TNFRSF1BP20333 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFRSF1BP20333 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 AP002414.1-201ENST00000391405 1147 ntBASIC15.68■□□□□ 0.1
TNFRSF1BP20333 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms