Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.85■□□□□ 0.29
XRCC1P18887 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.85■□□□□ 0.29
XRCC1P18887 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
XRCC1P18887 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC1P18887 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC1P18887 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC1P18887 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC1P18887 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC1P18887 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC1P18887 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.85■□□□□ 0.29
XRCC1P18887 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
XRCC1P18887 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC1P18887 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC1P18887 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
XRCC1P18887 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC1P18887 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC1P18887 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC1P18887 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC1P18887 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
XRCC1P18887 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC1P18887 PCDHB17P-201ENST00000539533 2393 ntBASIC16.84■□□□□ 0.29
XRCC1P18887 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC1P18887 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.84■□□□□ 0.29
XRCC1P18887 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC1P18887 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
XRCC1P18887 AC108751.1-201ENST00000490852 363 ntBASIC16.84■□□□□ 0.29
XRCC1P18887 POLD2P1-201ENST00000511220 997 ntBASIC16.84■□□□□ 0.29
XRCC1P18887 IGHV3-65-201ENST00000523210 341 ntBASIC16.84■□□□□ 0.29
XRCC1P18887 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.84■□□□□ 0.29
XRCC1P18887 AC140113.2-201ENST00000604370 208 ntBASIC16.84■□□□□ 0.29
XRCC1P18887 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC1P18887 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
XRCC1P18887 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC1P18887 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC1P18887 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC1P18887 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC1P18887 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC1P18887 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.84■□□□□ 0.29
XRCC1P18887 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC1P18887 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC1P18887 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.84■□□□□ 0.29
XRCC1P18887 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC1P18887 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC1P18887 LYSMD4-203ENST00000378904 2122 ntBASIC16.84■□□□□ 0.29
XRCC1P18887 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
XRCC1P18887 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.83■□□□□ 0.29
XRCC1P18887 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
XRCC1P18887 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
XRCC1P18887 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
XRCC1P18887 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
XRCC1P18887 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
XRCC1P18887 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
XRCC1P18887 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
XRCC1P18887 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
XRCC1P18887 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.83■□□□□ 0.28
XRCC1P18887 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
XRCC1P18887 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.83■□□□□ 0.28
XRCC1P18887 AP002414.1-201ENST00000391405 1147 ntBASIC16.83■□□□□ 0.28
XRCC1P18887 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.83■□□□□ 0.28
XRCC1P18887 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
XRCC1P18887 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
XRCC1P18887 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.83■□□□□ 0.28
XRCC1P18887 PTCHD3P3-201ENST00000403073 906 ntBASIC16.83■□□□□ 0.28
XRCC1P18887 MED15P5-201ENST00000423150 992 ntBASIC16.83■□□□□ 0.28
XRCC1P18887 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
XRCC1P18887 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
XRCC1P18887 AC016396.2-201ENST00000562575 1417 ntBASIC16.83■□□□□ 0.28
XRCC1P18887 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
XRCC1P18887 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.83■□□□□ 0.28
XRCC1P18887 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
XRCC1P18887 AC026691.1-201ENST00000602502 2017 ntBASIC16.83■□□□□ 0.28
XRCC1P18887 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
XRCC1P18887 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
XRCC1P18887 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
XRCC1P18887 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
XRCC1P18887 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.82■□□□□ 0.28
XRCC1P18887 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
XRCC1P18887 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
XRCC1P18887 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.82■□□□□ 0.28
XRCC1P18887 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
XRCC1P18887 AL596257.1-201ENST00000641463 2694 ntBASIC16.82■□□□□ 0.28
XRCC1P18887 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.82■□□□□ 0.28
XRCC1P18887 AL590787.1-201ENST00000568856 1315 ntBASIC16.82■□□□□ 0.28
XRCC1P18887 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
XRCC1P18887 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
XRCC1P18887 MIR940-201ENST00000401276 94 ntBASIC16.82■□□□□ 0.28
XRCC1P18887 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.82■□□□□ 0.28
XRCC1P18887 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.82■□□□□ 0.28
XRCC1P18887 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.82■□□□□ 0.28
XRCC1P18887 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.82■□□□□ 0.28
XRCC1P18887 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.82■□□□□ 0.28
XRCC1P18887 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.82■□□□□ 0.28
XRCC1P18887 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
XRCC1P18887 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.82■□□□□ 0.28
XRCC1P18887 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
XRCC1P18887 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
XRCC1P18887 GGTLC5P-201ENST00000617623 998 ntBASIC16.82■□□□□ 0.28
XRCC1P18887 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.82■□□□□ 0.28
XRCC1P18887 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
XRCC1P18887 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms