Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.58■□□□□ 0.56
SMPD1P17405 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.58■□□□□ 0.56
SMPD1P17405 BANF1P1-201ENST00000553684 263 ntBASIC18.58■□□□□ 0.56
SMPD1P17405 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.58■□□□□ 0.56
SMPD1P17405 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.58■□□□□ 0.56
SMPD1P17405 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.58■□□□□ 0.56
SMPD1P17405 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.58■□□□□ 0.56
SMPD1P17405 RN7SL828P-201ENST00000607615 303 ntBASIC18.58■□□□□ 0.56
SMPD1P17405 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SMPD1P17405 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMPD1P17405 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMPD1P17405 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
SMPD1P17405 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.58■□□□□ 0.56
SMPD1P17405 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMPD1P17405 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMPD1P17405 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.58■□□□□ 0.56
SMPD1P17405 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMPD1P17405 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.57■□□□□ 0.56
SMPD1P17405 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SMPD1P17405 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMPD1P17405 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMPD1P17405 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMPD1P17405 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMPD1P17405 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMPD1P17405 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMPD1P17405 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.57■□□□□ 0.56
SMPD1P17405 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.57■□□□□ 0.56
SMPD1P17405 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.57■□□□□ 0.56
SMPD1P17405 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SMPD1P17405 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMPD1P17405 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.57■□□□□ 0.56
SMPD1P17405 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.57■□□□□ 0.56
SMPD1P17405 MTND6P24-201ENST00000440466 518 ntBASIC18.57■□□□□ 0.56
SMPD1P17405 AC098859.1-201ENST00000502915 1238 ntBASIC18.57■□□□□ 0.56
SMPD1P17405 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.57■□□□□ 0.56
SMPD1P17405 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.57■□□□□ 0.56
SMPD1P17405 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
SMPD1P17405 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.57■□□□□ 0.56
SMPD1P17405 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.57■□□□□ 0.56
SMPD1P17405 AL596325.1-201ENST00000563991 1082 ntBASIC18.57■□□□□ 0.56
SMPD1P17405 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMPD1P17405 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.57■□□□□ 0.56
SMPD1P17405 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMPD1P17405 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.57■□□□□ 0.56
SMPD1P17405 AC004233.3-201ENST00000607794 1269 ntBASIC18.57■□□□□ 0.56
SMPD1P17405 AL844908.2-201ENST00000609461 460 ntBASIC18.57■□□□□ 0.56
SMPD1P17405 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SMPD1P17405 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.57■□□□□ 0.56
SMPD1P17405 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.57■□□□□ 0.56
SMPD1P17405 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMPD1P17405 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SMPD1P17405 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMPD1P17405 AC007613.1-201ENST00000572811 2597 ntBASIC18.57■□□□□ 0.56
SMPD1P17405 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SMPD1P17405 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMPD1P17405 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMPD1P17405 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SMPD1P17405 KRT8P39-201ENST00000396270 1433 ntBASIC18.57■□□□□ 0.56
SMPD1P17405 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMPD1P17405 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMPD1P17405 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMPD1P17405 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SMPD1P17405 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMPD1P17405 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SMPD1P17405 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.56■□□□□ 0.56
SMPD1P17405 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.56■□□□□ 0.56
SMPD1P17405 AC067852.2-201ENST00000590513 2313 ntBASIC18.56■□□□□ 0.56
SMPD1P17405 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SMPD1P17405 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.56■□□□□ 0.56
SMPD1P17405 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMPD1P17405 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMPD1P17405 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SMPD1P17405 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMPD1P17405 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMPD1P17405 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMPD1P17405 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMPD1P17405 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMPD1P17405 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.56■□□□□ 0.56
SMPD1P17405 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.56■□□□□ 0.56
SMPD1P17405 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
SMPD1P17405 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.56■□□□□ 0.56
SMPD1P17405 AC027307.3-201ENST00000594262 1100 ntBASIC18.56■□□□□ 0.56
SMPD1P17405 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.56■□□□□ 0.56
SMPD1P17405 AL589739.1-201ENST00000607720 493 ntBASIC18.56■□□□□ 0.56
SMPD1P17405 AC008738.7-201ENST00000609744 511 ntBASIC18.56■□□□□ 0.56
SMPD1P17405 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.56■□□□□ 0.56
SMPD1P17405 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.56■□□□□ 0.56
SMPD1P17405 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.56■□□□□ 0.56
SMPD1P17405 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.56■□□□□ 0.56
SMPD1P17405 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.56■□□□□ 0.56
SMPD1P17405 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMPD1P17405 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMPD1P17405 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.55■□□□□ 0.56
SMPD1P17405 CETN4P-206ENST00000642099 2168 ntBASIC18.55■□□□□ 0.56
SMPD1P17405 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMPD1P17405 AC087499.5-201ENST00000452760 1342 ntBASIC18.55■□□□□ 0.56
SMPD1P17405 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMPD1P17405 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMPD1P17405 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMPD1P17405 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms