Protein–RNA interactions for Protein: P13073

COX4I1, Cytochrome c oxidase subunit 4 isoform 1, mitochondrial, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1P13073 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
COX4I1P13073 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.28■□□□□ 0.2
COX4I1P13073 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COX4I1P13073 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COX4I1P13073 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
COX4I1P13073 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COX4I1P13073 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.28■□□□□ 0.2
COX4I1P13073 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COX4I1P13073 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COX4I1P13073 COX11P1-201ENST00000489116 835 ntBASIC16.28■□□□□ 0.2
COX4I1P13073 RNF126P1-202ENST00000569893 925 ntBASIC16.28■□□□□ 0.2
COX4I1P13073 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COX4I1P13073 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COX4I1P13073 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COX4I1P13073 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COX4I1P13073 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COX4I1P13073 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COX4I1P13073 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COX4I1P13073 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COX4I1P13073 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COX4I1P13073 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
COX4I1P13073 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
COX4I1P13073 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
COX4I1P13073 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COX4I1P13073 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COX4I1P13073 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.28■□□□□ 0.2
COX4I1P13073 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COX4I1P13073 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
COX4I1P13073 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
COX4I1P13073 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
COX4I1P13073 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
COX4I1P13073 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
COX4I1P13073 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COX4I1P13073 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.27■□□□□ 0.2
COX4I1P13073 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
COX4I1P13073 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
COX4I1P13073 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COX4I1P13073 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COX4I1P13073 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.27■□□□□ 0.2
COX4I1P13073 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
COX4I1P13073 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COX4I1P13073 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
COX4I1P13073 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COX4I1P13073 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.27■□□□□ 0.2
COX4I1P13073 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
COX4I1P13073 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
COX4I1P13073 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
COX4I1P13073 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.27■□□□□ 0.2
COX4I1P13073 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COX4I1P13073 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.27■□□□□ 0.2
COX4I1P13073 SLC25A3P1-201ENST00000443844 931 ntBASIC16.27■□□□□ 0.2
COX4I1P13073 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.27■□□□□ 0.2
COX4I1P13073 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COX4I1P13073 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
COX4I1P13073 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.27■□□□□ 0.2
COX4I1P13073 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.27■□□□□ 0.2
COX4I1P13073 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.27■□□□□ 0.2
COX4I1P13073 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
COX4I1P13073 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
COX4I1P13073 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
COX4I1P13073 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COX4I1P13073 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COX4I1P13073 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
COX4I1P13073 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
COX4I1P13073 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
COX4I1P13073 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.27■□□□□ 0.19
COX4I1P13073 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
COX4I1P13073 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.27■□□□□ 0.19
COX4I1P13073 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.27■□□□□ 0.19
COX4I1P13073 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
COX4I1P13073 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COX4I1P13073 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COX4I1P13073 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.26■□□□□ 0.19
COX4I1P13073 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.26■□□□□ 0.19
COX4I1P13073 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.26■□□□□ 0.19
COX4I1P13073 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
COX4I1P13073 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.26■□□□□ 0.19
COX4I1P13073 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COX4I1P13073 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
COX4I1P13073 HBZP1-201ENST00000354915 429 ntBASIC16.26■□□□□ 0.19
COX4I1P13073 KLF4P1-201ENST00000412782 1185 ntBASIC16.26■□□□□ 0.19
COX4I1P13073 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COX4I1P13073 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.26■□□□□ 0.19
COX4I1P13073 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.26■□□□□ 0.19
COX4I1P13073 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.26■□□□□ 0.19
COX4I1P13073 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.26■□□□□ 0.19
COX4I1P13073 AC005336.2-201ENST00000593183 939 ntBASIC16.26■□□□□ 0.19
COX4I1P13073 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.26■□□□□ 0.19
COX4I1P13073 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.26■□□□□ 0.19
COX4I1P13073 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COX4I1P13073 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COX4I1P13073 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COX4I1P13073 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.26■□□□□ 0.19
COX4I1P13073 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COX4I1P13073 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
COX4I1P13073 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COX4I1P13073 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
COX4I1P13073 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COX4I1P13073 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COX4I1P13073 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms