Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGN1P05114 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMGN1P05114 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGN1P05114 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.31■□□□□ 0.04
HMGN1P05114 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGN1P05114 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGN1P05114 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGN1P05114 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.31■□□□□ 0.04
HMGN1P05114 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGN1P05114 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMGN1P05114 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.3■□□□□ 0.04
HMGN1P05114 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGN1P05114 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGN1P05114 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
HMGN1P05114 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGN1P05114 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.3■□□□□ 0.04
HMGN1P05114 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGN1P05114 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGN1P05114 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGN1P05114 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGN1P05114 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGN1P05114 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HMGN1P05114 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.3■□□□□ 0.04
HMGN1P05114 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGN1P05114 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
HMGN1P05114 CHCHD2P8-201ENST00000429873 447 ntBASIC15.3■□□□□ 0.04
HMGN1P05114 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.3■□□□□ 0.04
HMGN1P05114 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
HMGN1P05114 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HMGN1P05114 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
HMGN1P05114 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HMGN1P05114 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGN1P05114 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
HMGN1P05114 NUS1P1-201ENST00000446295 882 ntBASIC15.3■□□□□ 0.04
HMGN1P05114 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HMGN1P05114 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.3■□□□□ 0.04
HMGN1P05114 BX276092.5-203ENST00000456199 560 ntBASIC15.3■□□□□ 0.04
HMGN1P05114 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.3■□□□□ 0.04
HMGN1P05114 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.3■□□□□ 0.04
HMGN1P05114 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
HMGN1P05114 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGN1P05114 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGN1P05114 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.3■□□□□ 0.04
HMGN1P05114 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HMGN1P05114 KRT8P49-201ENST00000604166 1432 ntBASIC15.3■□□□□ 0.04
HMGN1P05114 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HMGN1P05114 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HMGN1P05114 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.3■□□□□ 0.04
HMGN1P05114 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.3■□□□□ 0.04
HMGN1P05114 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HMGN1P05114 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HMGN1P05114 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGN1P05114 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
HMGN1P05114 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGN1P05114 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.3■□□□□ 0.04
HMGN1P05114 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGN1P05114 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HMGN1P05114 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.29■□□□□ 0.04
HMGN1P05114 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGN1P05114 INTS4P1-201ENST00000438455 1935 ntBASIC15.29■□□□□ 0.04
HMGN1P05114 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGN1P05114 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGN1P05114 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMGN1P05114 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.29■□□□□ 0.04
HMGN1P05114 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.29■□□□□ 0.04
HMGN1P05114 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGN1P05114 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMGN1P05114 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGN1P05114 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGN1P05114 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HMGN1P05114 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.29■□□□□ 0.04
HMGN1P05114 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.29■□□□□ 0.04
HMGN1P05114 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMGN1P05114 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMGN1P05114 AL136379.1-201ENST00000623471 2642 ntBASIC15.29■□□□□ 0.04
HMGN1P05114 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGN1P05114 AP002414.1-201ENST00000391405 1147 ntBASIC15.29■□□□□ 0.04
HMGN1P05114 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGN1P05114 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.29■□□□□ 0.04
HMGN1P05114 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HMGN1P05114 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
HMGN1P05114 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.29■□□□□ 0.04
HMGN1P05114 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.29■□□□□ 0.04
HMGN1P05114 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HMGN1P05114 AC066615.1-201ENST00000640911 628 ntBASIC15.29■□□□□ 0.04
HMGN1P05114 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.29■□□□□ 0.04
HMGN1P05114 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HMGN1P05114 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGN1P05114 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
HMGN1P05114 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HMGN1P05114 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGN1P05114 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.29■□□□□ 0.04
HMGN1P05114 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGN1P05114 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGN1P05114 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGN1P05114 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.29■□□□□ 0.04
HMGN1P05114 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.29■□□□□ 0.04
HMGN1P05114 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.29■□□□□ 0.04
HMGN1P05114 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.28■□□□□ 0.04
HMGN1P05114 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms