Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC12.87□□□□□ -0.35
TCRAP04437 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC12.87□□□□□ -0.35
TCRAP04437 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC12.87□□□□□ -0.35
TCRAP04437 VENTXP5-201ENST00000523979 775 ntBASIC12.87□□□□□ -0.35
TCRAP04437 CD320-202ENST00000537716 1119 ntTSL 2 BASIC12.87□□□□□ -0.35
TCRAP04437 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC12.87□□□□□ -0.35
TCRAP04437 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TCRAP04437 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC12.87□□□□□ -0.35
TCRAP04437 WDR6-223ENST00000627177 207 ntTSL 2 BASIC12.87□□□□□ -0.35
TCRAP04437 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.87□□□□□ -0.35
TCRAP04437 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TCRAP04437 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TCRAP04437 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TCRAP04437 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TCRAP04437 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TCRAP04437 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TCRAP04437 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TCRAP04437 AC132938.5-201ENST00000624980 1813 ntBASIC12.87□□□□□ -0.35
TCRAP04437 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TCRAP04437 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.87□□□□□ -0.35
TCRAP04437 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC12.87□□□□□ -0.35
TCRAP04437 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TCRAP04437 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TCRAP04437 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.87□□□□□ -0.35
TCRAP04437 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TCRAP04437 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TCRAP04437 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.87□□□□□ -0.35
TCRAP04437 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TCRAP04437 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
TCRAP04437 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.87□□□□□ -0.35
TCRAP04437 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC12.87□□□□□ -0.35
TCRAP04437 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TCRAP04437 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 NORAD-201ENST00000565493 5339 ntBASIC12.86□□□□□ -0.35
TCRAP04437 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.86□□□□□ -0.35
TCRAP04437 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TCRAP04437 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC12.86□□□□□ -0.35
TCRAP04437 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
TCRAP04437 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
TCRAP04437 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.86□□□□□ -0.35
TCRAP04437 AL513477.1-201ENST00000602865 2407 ntBASIC12.86□□□□□ -0.35
TCRAP04437 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 YBX1P2-201ENST00000489612 999 ntBASIC12.86□□□□□ -0.35
TCRAP04437 AC010203.1-204ENST00000548782 407 ntBASIC12.86□□□□□ -0.35
TCRAP04437 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC12.86□□□□□ -0.35
TCRAP04437 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC12.86□□□□□ -0.35
TCRAP04437 AC005336.2-201ENST00000593183 939 ntBASIC12.86□□□□□ -0.35
TCRAP04437 AC139887.4-201ENST00000607877 719 ntBASIC12.86□□□□□ -0.35
TCRAP04437 AL353801.3-201ENST00000609898 542 ntBASIC12.86□□□□□ -0.35
TCRAP04437 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
TCRAP04437 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC12.86□□□□□ -0.35
TCRAP04437 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.86□□□□□ -0.35
TCRAP04437 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC12.86□□□□□ -0.35
TCRAP04437 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TCRAP04437 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TCRAP04437 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.86□□□□□ -0.35
TCRAP04437 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TCRAP04437 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.86□□□□□ -0.35
TCRAP04437 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TCRAP04437 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC12.85□□□□□ -0.35
TCRAP04437 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TCRAP04437 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TCRAP04437 LGALS8-AS1-201ENST00000487567 1457 ntBASIC12.85□□□□□ -0.35
TCRAP04437 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.85□□□□□ -0.35
TCRAP04437 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.85□□□□□ -0.35
TCRAP04437 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
TCRAP04437 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TCRAP04437 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TCRAP04437 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TCRAP04437 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.85□□□□□ -0.35
TCRAP04437 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.85□□□□□ -0.35
TCRAP04437 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TCRAP04437 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms