Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL5O76039 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL5O76039 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL5O76039 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.59■□□□□ 0.73
CDKL5O76039 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL5O76039 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
CDKL5O76039 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL5O76039 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.58■□□□□ 0.73
CDKL5O76039 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CDKL5O76039 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDKL5O76039 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.58■□□□□ 0.73
CDKL5O76039 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CDKL5O76039 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDKL5O76039 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDKL5O76039 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDKL5O76039 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDKL5O76039 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.58■□□□□ 0.73
CDKL5O76039 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDKL5O76039 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDKL5O76039 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.58■□□□□ 0.73
CDKL5O76039 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDKL5O76039 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CDKL5O76039 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CDKL5O76039 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.58■□□□□ 0.72
CDKL5O76039 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CDKL5O76039 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.58■□□□□ 0.72
CDKL5O76039 MRPL3P1-201ENST00000400109 1033 ntBASIC19.58■□□□□ 0.72
CDKL5O76039 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDKL5O76039 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.58■□□□□ 0.72
CDKL5O76039 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.58■□□□□ 0.72
CDKL5O76039 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.58■□□□□ 0.72
CDKL5O76039 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.58■□□□□ 0.72
CDKL5O76039 AL049840.3-201ENST00000602669 611 ntBASIC19.58■□□□□ 0.72
CDKL5O76039 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
CDKL5O76039 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDKL5O76039 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDKL5O76039 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDKL5O76039 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CDKL5O76039 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDKL5O76039 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CDKL5O76039 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDKL5O76039 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDKL5O76039 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.57■□□□□ 0.72
CDKL5O76039 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL5O76039 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.57■□□□□ 0.72
CDKL5O76039 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
CDKL5O76039 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL5O76039 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL5O76039 HCG4-201ENST00000418983 998 ntBASIC19.57■□□□□ 0.72
CDKL5O76039 PRSS29P-201ENST00000440800 595 ntBASIC19.57■□□□□ 0.72
CDKL5O76039 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
CDKL5O76039 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.57■□□□□ 0.72
CDKL5O76039 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.57■□□□□ 0.72
CDKL5O76039 SLC25A6P4-201ENST00000586535 553 ntBASIC19.57■□□□□ 0.72
CDKL5O76039 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CDKL5O76039 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.57■□□□□ 0.72
CDKL5O76039 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.57■□□□□ 0.72
CDKL5O76039 AC004790.2-201ENST00000623588 572 ntBASIC19.57■□□□□ 0.72
CDKL5O76039 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL5O76039 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL5O76039 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL5O76039 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL5O76039 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL5O76039 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL5O76039 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL5O76039 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CDKL5O76039 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL5O76039 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CDKL5O76039 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.57■□□□□ 0.72
CDKL5O76039 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL5O76039 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL5O76039 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL5O76039 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL5O76039 AC092171.3-201ENST00000610122 2651 ntBASIC19.57■□□□□ 0.72
CDKL5O76039 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CDKL5O76039 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDKL5O76039 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDKL5O76039 SLC22A20-204ENST00000530038 1673 ntBASIC19.56■□□□□ 0.72
CDKL5O76039 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.56■□□□□ 0.72
CDKL5O76039 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDKL5O76039 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CDKL5O76039 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDKL5O76039 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDKL5O76039 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDKL5O76039 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.56■□□□□ 0.72
CDKL5O76039 PMS2P1-201ENST00000431037 1228 ntBASIC19.56■□□□□ 0.72
CDKL5O76039 AC098831.1-202ENST00000438821 336 ntBASIC19.56■□□□□ 0.72
CDKL5O76039 AC108751.1-201ENST00000490852 363 ntBASIC19.56■□□□□ 0.72
CDKL5O76039 AC087641.1-201ENST00000557561 1021 ntBASIC19.56■□□□□ 0.72
CDKL5O76039 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.56■□□□□ 0.72
CDKL5O76039 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CDKL5O76039 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CDKL5O76039 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.56■□□□□ 0.72
CDKL5O76039 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDKL5O76039 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDKL5O76039 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.56■□□□□ 0.72
CDKL5O76039 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.56■□□□□ 0.72
CDKL5O76039 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CDKL5O76039 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDKL5O76039 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms