Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
PTP4A3O75365 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.19■□□□□ 0.02
PTP4A3O75365 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTP4A3O75365 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.19■□□□□ 0.02
PTP4A3O75365 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTP4A3O75365 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTP4A3O75365 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.19■□□□□ 0.02
PTP4A3O75365 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.19■□□□□ 0.02
PTP4A3O75365 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
PTP4A3O75365 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.19■□□□□ 0.02
PTP4A3O75365 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PTP4A3O75365 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTP4A3O75365 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PTP4A3O75365 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.19■□□□□ 0.02
PTP4A3O75365 AC139887.3-201ENST00000568585 713 ntBASIC15.19■□□□□ 0.02
PTP4A3O75365 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.19■□□□□ 0.02
PTP4A3O75365 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.19■□□□□ 0.02
PTP4A3O75365 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.19■□□□□ 0.02
PTP4A3O75365 AC004706.3-202ENST00000621574 984 ntBASIC15.19■□□□□ 0.02
PTP4A3O75365 REXO1L3P-201ENST00000622202 1288 ntBASIC15.19■□□□□ 0.02
PTP4A3O75365 AC093458.2-201ENST00000623150 629 ntBASIC15.19■□□□□ 0.02
PTP4A3O75365 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.19■□□□□ 0.02
PTP4A3O75365 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTP4A3O75365 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTP4A3O75365 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.19■□□□□ 0.02
PTP4A3O75365 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTP4A3O75365 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTP4A3O75365 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTP4A3O75365 AC005052.1-201ENST00000625181 2492 ntBASIC15.19■□□□□ 0.02
PTP4A3O75365 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTP4A3O75365 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTP4A3O75365 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTP4A3O75365 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PTP4A3O75365 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTP4A3O75365 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.18■□□□□ 0.02
PTP4A3O75365 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.18■□□□□ 0.02
PTP4A3O75365 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PTP4A3O75365 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.18■□□□□ 0.02
PTP4A3O75365 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTP4A3O75365 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PTP4A3O75365 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTP4A3O75365 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.18■□□□□ 0.02
PTP4A3O75365 AL512652.2-201ENST00000625156 1716 ntBASIC15.18■□□□□ 0.02
PTP4A3O75365 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PTP4A3O75365 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTP4A3O75365 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.18■□□□□ 0.02
PTP4A3O75365 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.18■□□□□ 0.02
PTP4A3O75365 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.18■□□□□ 0.02
PTP4A3O75365 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.18■□□□□ 0.02
PTP4A3O75365 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PTP4A3O75365 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTP4A3O75365 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PTP4A3O75365 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTP4A3O75365 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTP4A3O75365 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTP4A3O75365 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.18■□□□□ 0.02
PTP4A3O75365 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTP4A3O75365 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.18■□□□□ 0.02
PTP4A3O75365 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTP4A3O75365 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.18■□□□□ 0.02
PTP4A3O75365 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.18■□□□□ 0.02
PTP4A3O75365 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PTP4A3O75365 MPDU1-223ENST00000582151 728 ntBASIC15.18■□□□□ 0.02
PTP4A3O75365 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.18■□□□□ 0.02
PTP4A3O75365 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTP4A3O75365 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTP4A3O75365 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTP4A3O75365 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.18■□□□□ 0.02
PTP4A3O75365 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTP4A3O75365 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.18■□□□□ 0.02
PTP4A3O75365 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PTP4A3O75365 GGT3P-204ENST00000453783 1664 ntBASIC15.18■□□□□ 0.02
PTP4A3O75365 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTP4A3O75365 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.18■□□□□ 0.02
PTP4A3O75365 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.18■□□□□ 0.02
PTP4A3O75365 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.18■□□□□ 0.02
PTP4A3O75365 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTP4A3O75365 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTP4A3O75365 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.17■□□□□ 0.02
PTP4A3O75365 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A3O75365 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.17■□□□□ 0.02
PTP4A3O75365 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.17■□□□□ 0.02
PTP4A3O75365 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A3O75365 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PTP4A3O75365 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.17■□□□□ 0.02
PTP4A3O75365 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
PTP4A3O75365 AL671710.1-201ENST00000610245 2349 ntBASIC15.17■□□□□ 0.02
PTP4A3O75365 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A3O75365 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A3O75365 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A3O75365 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A3O75365 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A3O75365 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A3O75365 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A3O75365 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PTP4A3O75365 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A3O75365 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A3O75365 AC022188.1-201ENST00000620960 1664 ntBASIC15.17■□□□□ 0.02
PTP4A3O75365 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A3O75365 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms