Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.81■□□□□ 0.12
HCN1O60741 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HCN1O60741 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.81■□□□□ 0.12
HCN1O60741 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.81■□□□□ 0.12
HCN1O60741 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.81■□□□□ 0.12
HCN1O60741 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HCN1O60741 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HCN1O60741 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.81■□□□□ 0.12
HCN1O60741 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.81■□□□□ 0.12
HCN1O60741 STK25P1-201ENST00000585406 838 ntBASIC15.81■□□□□ 0.12
HCN1O60741 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.81■□□□□ 0.12
HCN1O60741 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.81■□□□□ 0.12
HCN1O60741 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HCN1O60741 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
HCN1O60741 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCN1O60741 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCN1O60741 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCN1O60741 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCN1O60741 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
HCN1O60741 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HCN1O60741 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCN1O60741 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HCN1O60741 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCN1O60741 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCN1O60741 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCN1O60741 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCN1O60741 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCN1O60741 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
HCN1O60741 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCN1O60741 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HCN1O60741 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HCN1O60741 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HCN1O60741 AC093525.9-201ENST00000624961 1746 ntBASIC15.8■□□□□ 0.12
HCN1O60741 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCN1O60741 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCN1O60741 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCN1O60741 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.8■□□□□ 0.12
HCN1O60741 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HCN1O60741 AC104109.2-201ENST00000602919 1418 ntBASIC15.8■□□□□ 0.12
HCN1O60741 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.8■□□□□ 0.12
HCN1O60741 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HCN1O60741 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCN1O60741 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCN1O60741 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.8■□□□□ 0.12
HCN1O60741 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.8■□□□□ 0.12
HCN1O60741 KRT18P27-201ENST00000427733 1299 ntBASIC15.8■□□□□ 0.12
HCN1O60741 STK19B-204ENST00000512515 211 ntBASIC15.8■□□□□ 0.12
HCN1O60741 RNA5SP415-201ENST00000517246 115 ntBASIC15.8■□□□□ 0.12
HCN1O60741 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.8■□□□□ 0.12
HCN1O60741 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
HCN1O60741 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HCN1O60741 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.8■□□□□ 0.12
HCN1O60741 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.8■□□□□ 0.12
HCN1O60741 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.8■□□□□ 0.12
HCN1O60741 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCN1O60741 Z83851.2-201ENST00000609564 659 ntBASIC15.8■□□□□ 0.12
HCN1O60741 AC005593.1-201ENST00000624894 515 ntBASIC15.8■□□□□ 0.12
HCN1O60741 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCN1O60741 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCN1O60741 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.8■□□□□ 0.12
HCN1O60741 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCN1O60741 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.8■□□□□ 0.12
HCN1O60741 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCN1O60741 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCN1O60741 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HCN1O60741 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCN1O60741 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
HCN1O60741 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.8■□□□□ 0.12
HCN1O60741 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.8■□□□□ 0.12
HCN1O60741 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
HCN1O60741 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCN1O60741 AC106886.4-201ENST00000623557 2502 ntBASIC15.79■□□□□ 0.12
HCN1O60741 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
HCN1O60741 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCN1O60741 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCN1O60741 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCN1O60741 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCN1O60741 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCN1O60741 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.79■□□□□ 0.12
HCN1O60741 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HCN1O60741 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HCN1O60741 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCN1O60741 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HCN1O60741 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.79■□□□□ 0.12
HCN1O60741 NCF1C-201ENST00000438382 1427 ntBASIC15.79■□□□□ 0.12
HCN1O60741 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HCN1O60741 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HCN1O60741 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCN1O60741 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCN1O60741 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.79■□□□□ 0.12
HCN1O60741 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.79■□□□□ 0.12
HCN1O60741 AL591424.1-201ENST00000442569 1213 ntBASIC15.79■□□□□ 0.12
HCN1O60741 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HCN1O60741 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.79■□□□□ 0.12
HCN1O60741 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.79■□□□□ 0.12
HCN1O60741 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HCN1O60741 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.79■□□□□ 0.12
HCN1O60741 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCN1O60741 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.79■□□□□ 0.12
HCN1O60741 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms