Protein–RNA interactions for Protein: O60337

MARCH6, E3 ubiquitin-protein ligase MARCH6, humanhuman

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MARCH6O60337 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.23■□□□□ 0.67
MARCH6O60337 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MARCH6O60337 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
MARCH6O60337 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.23■□□□□ 0.67
MARCH6O60337 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MARCH6O60337 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MARCH6O60337 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MARCH6O60337 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MARCH6O60337 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.23■□□□□ 0.67
MARCH6O60337 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MARCH6O60337 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.23■□□□□ 0.67
MARCH6O60337 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MARCH6O60337 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MARCH6O60337 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.23■□□□□ 0.67
MARCH6O60337 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
MARCH6O60337 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.23■□□□□ 0.67
MARCH6O60337 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
MARCH6O60337 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
MARCH6O60337 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MARCH6O60337 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.22■□□□□ 0.67
MARCH6O60337 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
MARCH6O60337 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MARCH6O60337 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MARCH6O60337 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
MARCH6O60337 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.22■□□□□ 0.67
MARCH6O60337 AC002310.6-201ENST00000624451 1377 ntBASIC19.22■□□□□ 0.67
MARCH6O60337 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MARCH6O60337 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MARCH6O60337 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MARCH6O60337 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MARCH6O60337 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.22■□□□□ 0.67
MARCH6O60337 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
MARCH6O60337 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MARCH6O60337 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.22■□□□□ 0.67
MARCH6O60337 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MARCH6O60337 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MARCH6O60337 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
MARCH6O60337 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MARCH6O60337 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.22■□□□□ 0.67
MARCH6O60337 AC106730.1-201ENST00000566722 1090 ntBASIC19.22■□□□□ 0.67
MARCH6O60337 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.22■□□□□ 0.67
MARCH6O60337 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.22■□□□□ 0.67
MARCH6O60337 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MARCH6O60337 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.22■□□□□ 0.67
MARCH6O60337 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
MARCH6O60337 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
MARCH6O60337 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.22■□□□□ 0.67
MARCH6O60337 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.22■□□□□ 0.67
MARCH6O60337 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MARCH6O60337 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
MARCH6O60337 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MARCH6O60337 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MARCH6O60337 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
MARCH6O60337 AC129492.6-201ENST00000611383 1305 ntBASIC19.22■□□□□ 0.67
MARCH6O60337 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.22■□□□□ 0.67
MARCH6O60337 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
MARCH6O60337 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.22■□□□□ 0.67
MARCH6O60337 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MARCH6O60337 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
MARCH6O60337 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
MARCH6O60337 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MARCH6O60337 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.21■□□□□ 0.67
MARCH6O60337 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
MARCH6O60337 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MARCH6O60337 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.21■□□□□ 0.67
MARCH6O60337 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MARCH6O60337 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MARCH6O60337 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MARCH6O60337 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MARCH6O60337 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MARCH6O60337 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MARCH6O60337 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
MARCH6O60337 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MARCH6O60337 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
MARCH6O60337 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
MARCH6O60337 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
MARCH6O60337 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
MARCH6O60337 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MARCH6O60337 AC007967.2-201ENST00000432613 625 ntBASIC19.21■□□□□ 0.67
MARCH6O60337 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.21■□□□□ 0.67
MARCH6O60337 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.21■□□□□ 0.67
MARCH6O60337 AC034105.1-201ENST00000563488 319 ntBASIC19.21■□□□□ 0.67
MARCH6O60337 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.21■□□□□ 0.67
MARCH6O60337 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.21■□□□□ 0.67
MARCH6O60337 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
MARCH6O60337 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.21■□□□□ 0.67
MARCH6O60337 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MARCH6O60337 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
MARCH6O60337 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.21■□□□□ 0.67
MARCH6O60337 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MARCH6O60337 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MARCH6O60337 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
MARCH6O60337 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MARCH6O60337 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MARCH6O60337 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MARCH6O60337 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
MARCH6O60337 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MARCH6O60337 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MARCH6O60337 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MARCH6O60337 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms