Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CASQ2O14958 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASQ2O14958 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASQ2O14958 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASQ2O14958 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CASQ2O14958 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASQ2O14958 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CASQ2O14958 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASQ2O14958 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.05■□□□□ 0.16
CASQ2O14958 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASQ2O14958 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CASQ2O14958 MYCLP1-201ENST00000372451 1075 ntBASIC16.05■□□□□ 0.16
CASQ2O14958 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.05■□□□□ 0.16
CASQ2O14958 PVRIG2P-201ENST00000435460 978 ntBASIC16.05■□□□□ 0.16
CASQ2O14958 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.05■□□□□ 0.16
CASQ2O14958 AL023803.3-201ENST00000615559 522 ntBASIC16.05■□□□□ 0.16
CASQ2O14958 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASQ2O14958 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CASQ2O14958 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
CASQ2O14958 AP005117.1-202ENST00000581724 1908 ntBASIC16.05■□□□□ 0.16
CASQ2O14958 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CASQ2O14958 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
CASQ2O14958 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CASQ2O14958 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CASQ2O14958 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASQ2O14958 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.05■□□□□ 0.16
CASQ2O14958 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASQ2O14958 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASQ2O14958 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASQ2O14958 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASQ2O14958 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CASQ2O14958 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CASQ2O14958 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.04■□□□□ 0.16
CASQ2O14958 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASQ2O14958 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CASQ2O14958 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CASQ2O14958 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASQ2O14958 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CASQ2O14958 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASQ2O14958 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASQ2O14958 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.04■□□□□ 0.16
CASQ2O14958 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.04■□□□□ 0.16
CASQ2O14958 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CASQ2O14958 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CASQ2O14958 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.04■□□□□ 0.16
CASQ2O14958 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.04■□□□□ 0.16
CASQ2O14958 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.04■□□□□ 0.16
CASQ2O14958 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.04■□□□□ 0.16
CASQ2O14958 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.04■□□□□ 0.16
CASQ2O14958 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CASQ2O14958 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASQ2O14958 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASQ2O14958 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASQ2O14958 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CASQ2O14958 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASQ2O14958 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CASQ2O14958 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASQ2O14958 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.04■□□□□ 0.16
CASQ2O14958 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASQ2O14958 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CASQ2O14958 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CASQ2O14958 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CASQ2O14958 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CASQ2O14958 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.03■□□□□ 0.16
CASQ2O14958 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.03■□□□□ 0.16
CASQ2O14958 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASQ2O14958 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASQ2O14958 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASQ2O14958 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASQ2O14958 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CASQ2O14958 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASQ2O14958 TUBB8P12-201ENST00000308911 1335 ntBASIC16.03■□□□□ 0.16
CASQ2O14958 TUBB7P-202ENST00000428444 1305 ntBASIC16.03■□□□□ 0.16
CASQ2O14958 TUBB8P7-204ENST00000567960 1332 ntBASIC16.03■□□□□ 0.16
CASQ2O14958 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CASQ2O14958 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.03■□□□□ 0.16
CASQ2O14958 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASQ2O14958 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASQ2O14958 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASQ2O14958 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.03■□□□□ 0.16
CASQ2O14958 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASQ2O14958 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.03■□□□□ 0.16
CASQ2O14958 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASQ2O14958 AC097488.1-201ENST00000507834 756 ntBASIC16.03■□□□□ 0.16
CASQ2O14958 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.03■□□□□ 0.16
CASQ2O14958 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.03■□□□□ 0.16
CASQ2O14958 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.03■□□□□ 0.16
CASQ2O14958 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.03■□□□□ 0.16
CASQ2O14958 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASQ2O14958 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CASQ2O14958 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CASQ2O14958 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASQ2O14958 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CASQ2O14958 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
CASQ2O14958 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASQ2O14958 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.03■□□□□ 0.16
CASQ2O14958 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASQ2O14958 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.03■□□□□ 0.16
CASQ2O14958 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASQ2O14958 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms