Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 CXCL1P1-201ENST00000502804 216 ntBASIC14.88□□□□□ -0.03
NPIPB4C9JG80 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 AL645728.2-201ENST00000641974 660 ntBASIC14.88□□□□□ -0.03
NPIPB4C9JG80 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 AP001005.1-201ENST00000571755 1248 ntBASIC14.87□□□□□ -0.03
NPIPB4C9JG80 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB4C9JG80 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.86□□□□□ -0.03
NPIPB4C9JG80 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
NPIPB4C9JG80 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
NPIPB4C9JG80 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.86□□□□□ -0.03
NPIPB4C9JG80 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPB4C9JG80 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPB4C9JG80 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.86□□□□□ -0.03
NPIPB4C9JG80 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPB4C9JG80 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NPIPB4C9JG80 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NPIPB4C9JG80 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPB4C9JG80 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.86□□□□□ -0.03
NPIPB4C9JG80 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NPIPB4C9JG80 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPB4C9JG80 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms