Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 STK19B-204ENST00000512515 211 ntBASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 AL441883.1-201ENST00000566170 1045 ntBASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 AL031432.5-201ENST00000641059 760 ntBASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 AC009336.1-201ENST00000608941 1553 ntBASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV18A0A075B6X5 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms