Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 CICP14-201ENST00000629111 2732 ntBASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 LINC00167-201ENST00000530583 1419 ntBASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 AC004951.3-201ENST00000418645 1148 ntBASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 TK1-204ENST00000590430 683 ntTSL 3 BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 NTF6G-201ENST00000591094 616 ntBASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 AC106881.1-201ENST00000605849 3329 ntBASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAPPC1Q9Y5R8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 AL355355.2-201ENST00000442321 338 ntBASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 OR2A1-AS1-207ENST00000486094 819 ntBASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 AL445675.2-201ENST00000620291 557 ntBASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms