Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 AL136317.3-201ENST00000618497 906 ntBASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 KRT8P49-201ENST00000604166 1432 ntBASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 AC116353.5-201ENST00000638148 1699 ntBASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 RNU1-129P-201ENST00000384064 167 ntBASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 SPCS2P4-201ENST00000436160 681 ntBASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 MIR3909-201ENST00000579518 119 ntBASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 U1.21-201ENST00000580816 167 ntBASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 MPDU1-223ENST00000582151 728 ntBASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
NCKAP1Q9Y2A7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 FAM8A3P-201ENST00000427218 844 ntBASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 RBPMS2P1-201ENST00000437762 623 ntBASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 SLC22A20-204ENST00000530038 1673 ntBASIC16.85■□□□□ 0.29
NCKAP1Q9Y2A7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCKAP1Q9Y2A7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.84■□□□□ 0.29
NCKAP1Q9Y2A7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCKAP1Q9Y2A7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.84■□□□□ 0.29
NCKAP1Q9Y2A7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NCKAP1Q9Y2A7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NCKAP1Q9Y2A7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCKAP1Q9Y2A7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCKAP1Q9Y2A7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.84■□□□□ 0.29
NCKAP1Q9Y2A7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NCKAP1Q9Y2A7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCKAP1Q9Y2A7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCKAP1Q9Y2A7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms