Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 DUX4L17-201ENST00000557360 1267 ntBASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 AC010331.1-201ENST00000611423 582 ntBASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 AP000550.4-202ENST00000639755 178 ntBASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 AC148477.5-201ENST00000625164 1645 ntBASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 LINC00895-201ENST00000629028 1637 ntBASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 AC079776.2-201ENST00000641154 1609 ntBASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.64■□□□□ 0.09
POLR2J3Q9H1A7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 AC087388.1-201ENST00000571370 1112 ntBASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 AC092364.2-201ENST00000596710 2692 ntBASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 AL391256.1-201ENST00000443260 1855 ntBASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
POLR2J3Q9H1A7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 PRYP5-201ENST00000451909 266 ntBASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 KRT18P21-201ENST00000515767 1272 ntBASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 MIR3180-1-201ENST00000580374 94 ntBASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 MIR3180-3-201ENST00000584616 94 ntBASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms