Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.96□□□□□ -0.02
COMMD4Q9H0A8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.02
COMMD4Q9H0A8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
COMMD4Q9H0A8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.96□□□□□ -0.02
COMMD4Q9H0A8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.02
COMMD4Q9H0A8 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
COMMD4Q9H0A8 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
COMMD4Q9H0A8 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 AL671277.2-201ENST00000458060 996 ntBASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 AC073592.5-201ENST00000624854 528 ntBASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 AC022188.1-201ENST00000620960 1664 ntBASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
COMMD4Q9H0A8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 RCN1P1-201ENST00000400413 996 ntBASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
COMMD4Q9H0A8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms