Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.57■□□□□ 0.24
NPAS2Q99743 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
NPAS2Q99743 AP002469.2-201ENST00000531724 424 ntBASIC16.57■□□□□ 0.24
NPAS2Q99743 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
NPAS2Q99743 AL121912.1-201ENST00000603683 238 ntBASIC16.57■□□□□ 0.24
NPAS2Q99743 AL591684.3-201ENST00000605187 298 ntBASIC16.57■□□□□ 0.24
NPAS2Q99743 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
NPAS2Q99743 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS2Q99743 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS2Q99743 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
NPAS2Q99743 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.57■□□□□ 0.24
NPAS2Q99743 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.57■□□□□ 0.24
NPAS2Q99743 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS2Q99743 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS2Q99743 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS2Q99743 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS2Q99743 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS2Q99743 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
NPAS2Q99743 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS2Q99743 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.56■□□□□ 0.24
NPAS2Q99743 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS2Q99743 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.56■□□□□ 0.24
NPAS2Q99743 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.56■□□□□ 0.24
NPAS2Q99743 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.56■□□□□ 0.24
NPAS2Q99743 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
NPAS2Q99743 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS2Q99743 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS2Q99743 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS2Q99743 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NPAS2Q99743 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS2Q99743 COX5BP2-201ENST00000392354 334 ntBASIC16.56■□□□□ 0.24
NPAS2Q99743 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
NPAS2Q99743 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.56■□□□□ 0.24
NPAS2Q99743 SAPCD2P3-201ENST00000455031 850 ntBASIC16.56■□□□□ 0.24
NPAS2Q99743 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS2Q99743 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS2Q99743 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.56■□□□□ 0.24
NPAS2Q99743 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.56■□□□□ 0.24
NPAS2Q99743 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NPAS2Q99743 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NPAS2Q99743 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS2Q99743 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS2Q99743 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS2Q99743 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS2Q99743 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS2Q99743 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS2Q99743 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS2Q99743 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.56■□□□□ 0.24
NPAS2Q99743 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
NPAS2Q99743 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.56■□□□□ 0.24
NPAS2Q99743 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.56■□□□□ 0.24
NPAS2Q99743 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS2Q99743 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.55■□□□□ 0.24
NPAS2Q99743 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
NPAS2Q99743 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS2Q99743 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS2Q99743 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
NPAS2Q99743 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.55■□□□□ 0.24
NPAS2Q99743 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
NPAS2Q99743 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS2Q99743 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.55■□□□□ 0.24
NPAS2Q99743 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS2Q99743 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.55■□□□□ 0.24
NPAS2Q99743 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
NPAS2Q99743 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.55■□□□□ 0.24
NPAS2Q99743 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
NPAS2Q99743 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
NPAS2Q99743 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS2Q99743 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.55■□□□□ 0.24
NPAS2Q99743 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS2Q99743 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS2Q99743 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS2Q99743 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
NPAS2Q99743 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS2Q99743 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
NPAS2Q99743 AC132008.2-207ENST00000454517 770 ntBASIC16.55■□□□□ 0.24
NPAS2Q99743 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.55■□□□□ 0.24
NPAS2Q99743 AC109462.3-201ENST00000573934 613 ntBASIC16.55■□□□□ 0.24
NPAS2Q99743 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
NPAS2Q99743 AC019129.2-201ENST00000609837 1235 ntBASIC16.55■□□□□ 0.24
NPAS2Q99743 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS2Q99743 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.55■□□□□ 0.24
NPAS2Q99743 TP73-AS1-207ENST00000624167 988 ntBASIC16.55■□□□□ 0.24
NPAS2Q99743 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.55■□□□□ 0.24
NPAS2Q99743 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS2Q99743 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
NPAS2Q99743 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS2Q99743 EGFEM1P-202ENST00000431685 1563 ntBASIC16.55■□□□□ 0.24
NPAS2Q99743 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS2Q99743 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS2Q99743 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS2Q99743 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.55■□□□□ 0.24
NPAS2Q99743 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS2Q99743 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS2Q99743 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS2Q99743 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NPAS2Q99743 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NPAS2Q99743 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.54■□□□□ 0.24
NPAS2Q99743 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS2Q99743 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms