Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.68■□□□□ 0.9
NLRP3Q96P20 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NLRP3Q96P20 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NLRP3Q96P20 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLRP3Q96P20 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NLRP3Q96P20 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
NLRP3Q96P20 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
NLRP3Q96P20 AC138932.1-201ENST00000534164 6830 ntBASIC20.67■□□□□ 0.9
NLRP3Q96P20 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRP3Q96P20 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRP3Q96P20 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRP3Q96P20 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRP3Q96P20 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NLRP3Q96P20 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NLRP3Q96P20 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NLRP3Q96P20 GRAP-202ENST00000395635 834 ntTSL 2 BASIC20.67■□□□□ 0.9
NLRP3Q96P20 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.67■□□□□ 0.9
NLRP3Q96P20 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC20.67■□□□□ 0.9
NLRP3Q96P20 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC20.67■□□□□ 0.9
NLRP3Q96P20 SPDYE22P-201ENST00000582158 798 ntBASIC20.67■□□□□ 0.9
NLRP3Q96P20 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.67■□□□□ 0.9
NLRP3Q96P20 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.67■□□□□ 0.9
NLRP3Q96P20 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
NLRP3Q96P20 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRP3Q96P20 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRP3Q96P20 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRP3Q96P20 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRP3Q96P20 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.67■□□□□ 0.9
NLRP3Q96P20 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRP3Q96P20 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NLRP3Q96P20 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRP3Q96P20 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.67■□□□□ 0.9
NLRP3Q96P20 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NLRP3Q96P20 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.67■□□□□ 0.9
NLRP3Q96P20 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.67■□□□□ 0.9
NLRP3Q96P20 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRP3Q96P20 AC073439.1-201ENST00000624121 1774 ntBASIC20.67■□□□□ 0.9
NLRP3Q96P20 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NLRP3Q96P20 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.66■□□□□ 0.9
NLRP3Q96P20 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRP3Q96P20 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRP3Q96P20 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NLRP3Q96P20 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRP3Q96P20 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.66■□□□□ 0.9
NLRP3Q96P20 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRP3Q96P20 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRP3Q96P20 FAM220BP-201ENST00000377689 816 ntBASIC20.66■□□□□ 0.9
NLRP3Q96P20 AL353705.2-201ENST00000428243 662 ntBASIC20.66■□□□□ 0.9
NLRP3Q96P20 COQ9-214ENST00000567933 882 ntTSL 3 BASIC20.66■□□□□ 0.9
NLRP3Q96P20 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
NLRP3Q96P20 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.66■□□□□ 0.9
NLRP3Q96P20 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRP3Q96P20 AC004233.3-201ENST00000607794 1269 ntBASIC20.66■□□□□ 0.9
NLRP3Q96P20 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC20.66■□□□□ 0.9
NLRP3Q96P20 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC20.66■□□□□ 0.9
NLRP3Q96P20 AC025048.6-201ENST00000634326 1161 ntBASIC20.66■□□□□ 0.9
NLRP3Q96P20 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.66■□□□□ 0.9
NLRP3Q96P20 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NLRP3Q96P20 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NLRP3Q96P20 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.66■□□□□ 0.9
NLRP3Q96P20 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.66■□□□□ 0.9
NLRP3Q96P20 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRP3Q96P20 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NLRP3Q96P20 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NLRP3Q96P20 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRP3Q96P20 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NLRP3Q96P20 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRP3Q96P20 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRP3Q96P20 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.66■□□□□ 0.9
NLRP3Q96P20 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRP3Q96P20 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRP3Q96P20 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.66■□□□□ 0.9
NLRP3Q96P20 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRP3Q96P20 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
NLRP3Q96P20 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLRP3Q96P20 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLRP3Q96P20 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLRP3Q96P20 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NLRP3Q96P20 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.65■□□□□ 0.9
NLRP3Q96P20 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLRP3Q96P20 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NLRP3Q96P20 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLRP3Q96P20 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLRP3Q96P20 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.65■□□□□ 0.9
NLRP3Q96P20 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLRP3Q96P20 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.65■□□□□ 0.9
NLRP3Q96P20 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.65■□□□□ 0.9
NLRP3Q96P20 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NLRP3Q96P20 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
NLRP3Q96P20 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLRP3Q96P20 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
NLRP3Q96P20 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.65■□□□□ 0.9
NLRP3Q96P20 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLRP3Q96P20 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
NLRP3Q96P20 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NLRP3Q96P20 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NLRP3Q96P20 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NLRP3Q96P20 AC006277.1-201ENST00000624348 1610 ntBASIC20.64■□□□□ 0.9
NLRP3Q96P20 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.64■□□□□ 0.9
NLRP3Q96P20 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms