Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 AC090164.3-201ENST00000610780 2143 ntBASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NECTIN4Q96NY8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 MTND6P24-201ENST00000440466 518 ntBASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 ZNF890P-202ENST00000530367 1156 ntBASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 HILS1-202ENST00000545329 423 ntBASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 AL162274.1-201ENST00000617191 1098 ntBASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN4Q96NY8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NECTIN4Q96NY8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NECTIN4Q96NY8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NECTIN4Q96NY8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
NECTIN4Q96NY8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
NECTIN4Q96NY8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.33■□□□□ 0.37
NECTIN4Q96NY8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NECTIN4Q96NY8 AL138781.2-201ENST00000617896 1843 ntBASIC17.33■□□□□ 0.37
NECTIN4Q96NY8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
NECTIN4Q96NY8 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.33■□□□□ 0.37
NECTIN4Q96NY8 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.33■□□□□ 0.37
NECTIN4Q96NY8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NECTIN4Q96NY8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
NECTIN4Q96NY8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.33■□□□□ 0.37
NECTIN4Q96NY8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NECTIN4Q96NY8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.33■□□□□ 0.37
NECTIN4Q96NY8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 KRT8P49-201ENST00000604166 1432 ntBASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 RN7SL752P-201ENST00000463779 287 ntBASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 RN7SL828P-201ENST00000607615 303 ntBASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NECTIN4Q96NY8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 LINC00896-202ENST00000609602 2128 ntBASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 AL512384.1-201ENST00000406683 331 ntBASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 RPL37AP1-201ENST00000412502 279 ntBASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN4Q96NY8 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms