Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GRAMD1AQ96CP6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.37■□□□□ 0.37
GRAMD1AQ96CP6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.37■□□□□ 0.37
GRAMD1AQ96CP6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.37■□□□□ 0.37
GRAMD1AQ96CP6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GRAMD1AQ96CP6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
GRAMD1AQ96CP6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
GRAMD1AQ96CP6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GRAMD1AQ96CP6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GRAMD1AQ96CP6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GRAMD1AQ96CP6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 MTDHP3-201ENST00000594186 672 ntBASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 FAM215A-202ENST00000632077 792 ntBASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
GRAMD1AQ96CP6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 FAM220CP-201ENST00000395253 831 ntBASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 AC092865.5-201ENST00000545435 363 ntBASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 AC148477.8-201ENST00000624298 468 ntBASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 AC243591.1-201ENST00000452967 1364 ntBASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 BX276092.7-203ENST00000637198 1536 ntBASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 AC105917.1-201ENST00000506637 2539 ntBASIC17.35■□□□□ 0.37
GRAMD1AQ96CP6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
GRAMD1AQ96CP6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
GRAMD1AQ96CP6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GRAMD1AQ96CP6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GRAMD1AQ96CP6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GRAMD1AQ96CP6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.34■□□□□ 0.37
GRAMD1AQ96CP6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
GRAMD1AQ96CP6 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GRAMD1AQ96CP6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms