Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAF3IP1Q8TDR0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 KRT18P56-201ENST00000507275 550 ntBASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 TERC-201ENST00000602385 541 ntBASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 IFNL4P1-201ENST00000607083 540 ntBASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP1Q8TDR0 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 AKR1C7P-201ENST00000305623 895 ntBASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms