Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC22.98■■□□□ 1.27
XRN1Q8IZH2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC22.98■■□□□ 1.27
XRN1Q8IZH2 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC22.98■■□□□ 1.27
XRN1Q8IZH2 AC025048.3-201ENST00000590609 569 ntBASIC22.98■■□□□ 1.27
XRN1Q8IZH2 AC074044.1-201ENST00000609673 707 ntBASIC22.98■■□□□ 1.27
XRN1Q8IZH2 AC005702.4-201ENST00000618393 416 ntBASIC22.98■■□□□ 1.27
XRN1Q8IZH2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
XRN1Q8IZH2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
XRN1Q8IZH2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
XRN1Q8IZH2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC22.98■■□□□ 1.27
XRN1Q8IZH2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
XRN1Q8IZH2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC22.98■■□□□ 1.27
XRN1Q8IZH2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC22.98■■□□□ 1.27
XRN1Q8IZH2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
XRN1Q8IZH2 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
XRN1Q8IZH2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
XRN1Q8IZH2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
XRN1Q8IZH2 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
XRN1Q8IZH2 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC22.97■■□□□ 1.27
XRN1Q8IZH2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC22.97■■□□□ 1.27
XRN1Q8IZH2 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC22.97■■□□□ 1.27
XRN1Q8IZH2 RPL28-206ENST00000558752 671 ntTSL 3 BASIC22.97■■□□□ 1.27
XRN1Q8IZH2 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC22.97■■□□□ 1.27
XRN1Q8IZH2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC22.97■■□□□ 1.27
XRN1Q8IZH2 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC22.97■■□□□ 1.27
XRN1Q8IZH2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
XRN1Q8IZH2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
XRN1Q8IZH2 KRT8P39-201ENST00000396270 1433 ntBASIC22.97■■□□□ 1.27
XRN1Q8IZH2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC22.97■■□□□ 1.27
XRN1Q8IZH2 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
XRN1Q8IZH2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
XRN1Q8IZH2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC22.97■■□□□ 1.27
XRN1Q8IZH2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
XRN1Q8IZH2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
XRN1Q8IZH2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 AC133552.6-201ENST00000613406 534 ntBASIC22.96■■□□□ 1.27
XRN1Q8IZH2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
XRN1Q8IZH2 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.27
XRN1Q8IZH2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
XRN1Q8IZH2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
XRN1Q8IZH2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC22.95■■□□□ 1.26
XRN1Q8IZH2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
XRN1Q8IZH2 LINC02012-201ENST00000608206 1725 ntBASIC22.95■■□□□ 1.26
XRN1Q8IZH2 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC22.95■■□□□ 1.26
XRN1Q8IZH2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
XRN1Q8IZH2 SDHAP3-202ENST00000515467 728 ntBASIC22.95■■□□□ 1.26
XRN1Q8IZH2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
XRN1Q8IZH2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC22.95■■□□□ 1.26
XRN1Q8IZH2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
XRN1Q8IZH2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
XRN1Q8IZH2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
XRN1Q8IZH2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
XRN1Q8IZH2 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
XRN1Q8IZH2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
XRN1Q8IZH2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
XRN1Q8IZH2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
XRN1Q8IZH2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
XRN1Q8IZH2 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC22.94■■□□□ 1.26
XRN1Q8IZH2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
XRN1Q8IZH2 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
XRN1Q8IZH2 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
XRN1Q8IZH2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
XRN1Q8IZH2 MEP1AP4-201ENST00000423244 1087 ntBASIC22.94■■□□□ 1.26
XRN1Q8IZH2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms