Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 AC006538.1-201ENST00000567905 1585 ntBASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 AC026691.1-201ENST00000602502 2017 ntBASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 AL391005.1-201ENST00000623953 2435 ntBASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 AC091304.2-201ENST00000564639 760 ntBASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 AC012313.10-201ENST00000623509 926 ntBASIC19.83■□□□□ 0.77
CCDC83Q8IWF9 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC83Q8IWF9 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC83Q8IWF9 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC83Q8IWF9 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC83Q8IWF9 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
CCDC83Q8IWF9 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC83Q8IWF9 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC83Q8IWF9 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CCDC83Q8IWF9 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC83Q8IWF9 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CCDC83Q8IWF9 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CCDC83Q8IWF9 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 PRELID1P1-202ENST00000567272 903 ntBASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 REXO1L6P-202ENST00000619970 1078 ntBASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC83Q8IWF9 CYP2T1P-202ENST00000641596 2535 ntBASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 PAWRP1-201ENST00000451083 565 ntBASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 AC139887.3-201ENST00000568585 713 ntBASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 AC004706.3-202ENST00000621574 984 ntBASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms