Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 AC016027.1-202ENST00000607927 1699 ntBASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 MIR346-201ENST00000362234 95 ntBASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 AC097493.3-201ENST00000509725 367 ntBASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 ALG1L8P-201ENST00000533887 760 ntBASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 CYP2A7P1-201ENST00000595391 815 ntBASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 AL358472.5-202ENST00000641448 1267 ntBASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC149Q6ZUS6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 HLA-J-202ENST00000469281 1241 ntBASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 AC005332.8-201ENST00000622750 2735 ntBASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC149Q6ZUS6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 CRB3P1-201ENST00000449338 276 ntBASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms