Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF20Q5VTR2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.15■□□□□ 0.82
RNF20Q5VTR2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.15■□□□□ 0.82
RNF20Q5VTR2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF20Q5VTR2 AC079781.3-201ENST00000449110 356 ntBASIC20.15■□□□□ 0.82
RNF20Q5VTR2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF20Q5VTR2 KRT126P-201ENST00000549467 1181 ntBASIC20.15■□□□□ 0.82
RNF20Q5VTR2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF20Q5VTR2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.15■□□□□ 0.82
RNF20Q5VTR2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF20Q5VTR2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF20Q5VTR2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF20Q5VTR2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF20Q5VTR2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF20Q5VTR2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF20Q5VTR2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF20Q5VTR2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF20Q5VTR2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF20Q5VTR2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF20Q5VTR2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF20Q5VTR2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF20Q5VTR2 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RNF20Q5VTR2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC20.14■□□□□ 0.82
RNF20Q5VTR2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RNF20Q5VTR2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RNF20Q5VTR2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 SLC25A6P2-201ENST00000497974 877 ntBASIC20.14■□□□□ 0.81
RNF20Q5VTR2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 AC091167.2-201ENST00000579581 588 ntBASIC20.14■□□□□ 0.81
RNF20Q5VTR2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 AC005593.1-201ENST00000624894 515 ntBASIC20.14■□□□□ 0.81
RNF20Q5VTR2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 AC092171.3-201ENST00000610122 2651 ntBASIC20.14■□□□□ 0.81
RNF20Q5VTR2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF20Q5VTR2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF20Q5VTR2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF20Q5VTR2 AC006538.1-201ENST00000567905 1585 ntBASIC20.13■□□□□ 0.81
RNF20Q5VTR2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RNF20Q5VTR2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RNF20Q5VTR2 AC129492.6-201ENST00000611383 1305 ntBASIC20.13■□□□□ 0.81
RNF20Q5VTR2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF20Q5VTR2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF20Q5VTR2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.13■□□□□ 0.81
RNF20Q5VTR2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF20Q5VTR2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RNF20Q5VTR2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF20Q5VTR2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.13■□□□□ 0.81
RNF20Q5VTR2 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF20Q5VTR2 IGHV3-65-201ENST00000523210 341 ntBASIC20.13■□□□□ 0.81
RNF20Q5VTR2 MPDU1-223ENST00000582151 728 ntBASIC20.13■□□□□ 0.81
RNF20Q5VTR2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF20Q5VTR2 AL031008.1-201ENST00000619963 541 ntBASIC20.13■□□□□ 0.81
RNF20Q5VTR2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF20Q5VTR2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
RNF20Q5VTR2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF20Q5VTR2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF20Q5VTR2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF20Q5VTR2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF20Q5VTR2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF20Q5VTR2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms