Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA4P78363 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.49□□□□□ -0.09
ABCA4P78363 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.48□□□□□ -0.09
ABCA4P78363 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA4P78363 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA4P78363 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.48□□□□□ -0.09
ABCA4P78363 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ABCA4P78363 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA4P78363 AC133963.1-201ENST00000504166 1679 ntBASIC14.48□□□□□ -0.09
ABCA4P78363 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA4P78363 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA4P78363 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA4P78363 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA4P78363 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA4P78363 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.48□□□□□ -0.09
ABCA4P78363 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA4P78363 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.48□□□□□ -0.09
ABCA4P78363 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.48□□□□□ -0.09
ABCA4P78363 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA4P78363 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA4P78363 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA4P78363 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA4P78363 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.48□□□□□ -0.09
ABCA4P78363 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA4P78363 FRMD8P1-201ENST00000440433 1524 ntBASIC14.48□□□□□ -0.09
ABCA4P78363 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA4P78363 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.48□□□□□ -0.09
ABCA4P78363 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA4P78363 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.48□□□□□ -0.09
ABCA4P78363 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.48□□□□□ -0.09
ABCA4P78363 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA4P78363 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
ABCA4P78363 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.48□□□□□ -0.09
ABCA4P78363 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.48□□□□□ -0.09
ABCA4P78363 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.48□□□□□ -0.09
ABCA4P78363 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.48□□□□□ -0.09
ABCA4P78363 AL662799.1-202ENST00000614205 422 ntBASIC14.48□□□□□ -0.09
ABCA4P78363 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.48□□□□□ -0.09
ABCA4P78363 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
ABCA4P78363 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA4P78363 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA4P78363 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA4P78363 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA4P78363 LINC00896-202ENST00000609602 2128 ntBASIC14.47□□□□□ -0.09
ABCA4P78363 AP3S2-216ENST00000617003 1561 ntBASIC14.47□□□□□ -0.09
ABCA4P78363 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA4P78363 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA4P78363 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.47□□□□□ -0.09
ABCA4P78363 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA4P78363 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA4P78363 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA4P78363 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA4P78363 HCG4-201ENST00000418983 998 ntBASIC14.47□□□□□ -0.09
ABCA4P78363 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.47□□□□□ -0.09
ABCA4P78363 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.47□□□□□ -0.09
ABCA4P78363 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.47□□□□□ -0.09
ABCA4P78363 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.47□□□□□ -0.09
ABCA4P78363 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.47□□□□□ -0.09
ABCA4P78363 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.47□□□□□ -0.09
ABCA4P78363 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA4P78363 SLC22A20-204ENST00000530038 1673 ntBASIC14.47□□□□□ -0.09
ABCA4P78363 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA4P78363 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
ABCA4P78363 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.47□□□□□ -0.09
ABCA4P78363 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA4P78363 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA4P78363 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA4P78363 BX323043.1-201ENST00000641006 1765 ntBASIC14.47□□□□□ -0.09
ABCA4P78363 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA4P78363 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA4P78363 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA4P78363 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA4P78363 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA4P78363 AL353732.1-201ENST00000569618 1459 ntBASIC14.47□□□□□ -0.09
ABCA4P78363 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA4P78363 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA4P78363 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA4P78363 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.46□□□□□ -0.09
ABCA4P78363 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.46□□□□□ -0.09
ABCA4P78363 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.46□□□□□ -0.09
ABCA4P78363 AL138828.2-201ENST00000615812 383 ntBASIC14.46□□□□□ -0.09
ABCA4P78363 MIR6080-201ENST00000617359 66 ntBASIC14.46□□□□□ -0.09
ABCA4P78363 AC008267.7-201ENST00000624570 1194 ntBASIC14.46□□□□□ -0.09
ABCA4P78363 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC14.46□□□□□ -0.09
ABCA4P78363 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.46□□□□□ -0.09
ABCA4P78363 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA4P78363 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA4P78363 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA4P78363 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.46□□□□□ -0.09
ABCA4P78363 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
ABCA4P78363 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA4P78363 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA4P78363 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA4P78363 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA4P78363 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA4P78363 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ABCA4P78363 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
ABCA4P78363 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
ABCA4P78363 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
ABCA4P78363 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms