Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC11.98□□□□□ -0.49
RPL39P62891 ZNF444P1-201ENST00000559497 298 ntBASIC11.98□□□□□ -0.49
RPL39P62891 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC11.98□□□□□ -0.49
RPL39P62891 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC11.98□□□□□ -0.49
RPL39P62891 AC111152.3-201ENST00000569699 673 ntBASIC11.98□□□□□ -0.49
RPL39P62891 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC11.98□□□□□ -0.49
RPL39P62891 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC11.98□□□□□ -0.49
RPL39P62891 GPR32P1-201ENST00000601788 811 ntBASIC11.98□□□□□ -0.49
RPL39P62891 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RPL39P62891 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPL39P62891 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
RPL39P62891 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPL39P62891 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
RPL39P62891 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPL39P62891 AC067930.6-201ENST00000623257 4947 ntBASIC11.98□□□□□ -0.49
RPL39P62891 ME2P1-201ENST00000426028 1970 ntBASIC11.98□□□□□ -0.49
RPL39P62891 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
RPL39P62891 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPL39P62891 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC11.97□□□□□ -0.49
RPL39P62891 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC11.97□□□□□ -0.49
RPL39P62891 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPL39P62891 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPL39P62891 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC11.97□□□□□ -0.49
RPL39P62891 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC11.97□□□□□ -0.49
RPL39P62891 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RPL39P62891 AC092384.3-202ENST00000564646 2873 ntBASIC11.97□□□□□ -0.49
RPL39P62891 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC11.97□□□□□ -0.49
RPL39P62891 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPL39P62891 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC11.97□□□□□ -0.49
RPL39P62891 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPL39P62891 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RPL39P62891 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RPL39P62891 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
RPL39P62891 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC11.97□□□□□ -0.49
RPL39P62891 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RPL39P62891 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RPL39P62891 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPL39P62891 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC11.97□□□□□ -0.49
RPL39P62891 TUBB8P12-201ENST00000308911 1335 ntBASIC11.97□□□□□ -0.49
RPL39P62891 TUBB7P-202ENST00000428444 1305 ntBASIC11.97□□□□□ -0.49
RPL39P62891 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC11.97□□□□□ -0.49
RPL39P62891 TUBB8P7-204ENST00000567960 1332 ntBASIC11.97□□□□□ -0.49
RPL39P62891 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC11.97□□□□□ -0.49
RPL39P62891 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPL39P62891 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPL39P62891 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RPL39P62891 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPL39P62891 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
RPL39P62891 FAM8A6P-201ENST00000407496 1135 ntBASIC11.97□□□□□ -0.49
RPL39P62891 CD70-202ENST00000423145 881 ntTSL 2 BASIC11.97□□□□□ -0.49
RPL39P62891 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC11.97□□□□□ -0.49
RPL39P62891 AC008550.1-201ENST00000511500 884 ntBASIC11.97□□□□□ -0.49
RPL39P62891 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC11.97□□□□□ -0.49
RPL39P62891 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC11.97□□□□□ -0.49
RPL39P62891 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC11.97□□□□□ -0.49
RPL39P62891 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC11.97□□□□□ -0.49
RPL39P62891 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
RPL39P62891 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPL39P62891 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC11.97□□□□□ -0.49
RPL39P62891 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPL39P62891 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPL39P62891 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPL39P62891 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
RPL39P62891 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC11.97□□□□□ -0.49
RPL39P62891 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPL39P62891 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC11.97□□□□□ -0.49
RPL39P62891 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPL39P62891 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPL39P62891 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC11.97□□□□□ -0.49
RPL39P62891 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
RPL39P62891 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
RPL39P62891 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC11.96□□□□□ -0.49
RPL39P62891 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
RPL39P62891 AL049757.1-201ENST00000616842 1596 ntBASIC11.96□□□□□ -0.49
RPL39P62891 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
RPL39P62891 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
RPL39P62891 MST1L-201ENST00000442552 2185 ntBASIC11.96□□□□□ -0.49
RPL39P62891 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RPL39P62891 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
RPL39P62891 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC11.96□□□□□ -0.49
RPL39P62891 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RPL39P62891 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RPL39P62891 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RPL39P62891 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC11.96□□□□□ -0.49
RPL39P62891 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
RPL39P62891 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RPL39P62891 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
RPL39P62891 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
RPL39P62891 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC11.96□□□□□ -0.49
RPL39P62891 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC11.96□□□□□ -0.49
RPL39P62891 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC11.96□□□□□ -0.49
RPL39P62891 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
RPL39P62891 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
RPL39P62891 VILL-207ENST00000465644 1857 ntTSL 5 BASIC11.96□□□□□ -0.49
RPL39P62891 KRT17P2-201ENST00000300992 1314 ntBASIC11.96□□□□□ -0.49
RPL39P62891 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RPL39P62891 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RPL39P62891 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RPL39P62891 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RPL39P62891 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms