Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
RFX5P48382 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.56■□□□□ 0.88
RFX5P48382 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX5P48382 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
RFX5P48382 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.56■□□□□ 0.88
RFX5P48382 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX5P48382 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.56■□□□□ 0.88
RFX5P48382 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RFX5P48382 SLC25A39P2-201ENST00000537614 270 ntBASIC20.56■□□□□ 0.88
RFX5P48382 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.56■□□□□ 0.88
RFX5P48382 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
RFX5P48382 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.56■□□□□ 0.88
RFX5P48382 AC027796.2-201ENST00000575326 344 ntBASIC20.56■□□□□ 0.88
RFX5P48382 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.56■□□□□ 0.88
RFX5P48382 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RFX5P48382 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.56■□□□□ 0.88
RFX5P48382 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RFX5P48382 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RFX5P48382 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.56■□□□□ 0.88
RFX5P48382 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX5P48382 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RFX5P48382 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX5P48382 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RFX5P48382 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.56■□□□□ 0.88
RFX5P48382 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX5P48382 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX5P48382 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.56■□□□□ 0.88
RFX5P48382 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC20.56■□□□□ 0.88
RFX5P48382 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.56■□□□□ 0.88
RFX5P48382 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RFX5P48382 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.55■□□□□ 0.88
RFX5P48382 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFX5P48382 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RFX5P48382 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX5P48382 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.55■□□□□ 0.88
RFX5P48382 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX5P48382 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.55■□□□□ 0.88
RFX5P48382 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX5P48382 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFX5P48382 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.55■□□□□ 0.88
RFX5P48382 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.55■□□□□ 0.88
RFX5P48382 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.55■□□□□ 0.88
RFX5P48382 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.55■□□□□ 0.88
RFX5P48382 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.55■□□□□ 0.88
RFX5P48382 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX5P48382 HLA-J-202ENST00000469281 1241 ntBASIC20.55■□□□□ 0.88
RFX5P48382 KRT18P34-201ENST00000488218 1270 ntBASIC20.55■□□□□ 0.88
RFX5P48382 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RFX5P48382 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX5P48382 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RFX5P48382 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.55■□□□□ 0.88
RFX5P48382 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.55■□□□□ 0.88
RFX5P48382 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.55■□□□□ 0.88
RFX5P48382 LINC00628-201ENST00000628516 1289 ntBASIC20.55■□□□□ 0.88
RFX5P48382 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.55■□□□□ 0.88
RFX5P48382 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.55■□□□□ 0.88
RFX5P48382 HLA-A-202ENST00000376806 1854 ntBASIC20.55■□□□□ 0.88
RFX5P48382 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFX5P48382 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC20.55■□□□□ 0.88
RFX5P48382 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RFX5P48382 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX5P48382 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX5P48382 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFX5P48382 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX5P48382 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX5P48382 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFX5P48382 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFX5P48382 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX5P48382 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX5P48382 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFX5P48382 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX5P48382 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
RFX5P48382 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.54■□□□□ 0.88
RFX5P48382 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RFX5P48382 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.54■□□□□ 0.88
RFX5P48382 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.54■□□□□ 0.88
RFX5P48382 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.54■□□□□ 0.88
RFX5P48382 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX5P48382 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RFX5P48382 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RFX5P48382 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFX5P48382 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
RFX5P48382 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFX5P48382 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFX5P48382 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.54■□□□□ 0.88
RFX5P48382 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.54■□□□□ 0.88
RFX5P48382 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX5P48382 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.54■□□□□ 0.88
RFX5P48382 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX5P48382 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFX5P48382 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX5P48382 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
RFX5P48382 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RFX5P48382 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX5P48382 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RFX5P48382 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX5P48382 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX5P48382 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX5P48382 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.54■□□□□ 0.88
RFX5P48382 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms