Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC1A2P43004 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC1A2P43004 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC1A2P43004 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.82■□□□□ 0.28
SLC1A2P43004 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC1A2P43004 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC1A2P43004 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A2P43004 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A2P43004 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A2P43004 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A2P43004 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
SLC1A2P43004 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A2P43004 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A2P43004 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC1A2P43004 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A2P43004 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SLC1A2P43004 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A2P43004 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A2P43004 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC1A2P43004 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC1A2P43004 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A2P43004 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A2P43004 KRT18P27-201ENST00000427733 1299 ntBASIC16.81■□□□□ 0.28
SLC1A2P43004 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC1A2P43004 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC1A2P43004 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC1A2P43004 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SLC1A2P43004 TP73-AS1-207ENST00000624167 988 ntBASIC16.81■□□□□ 0.28
SLC1A2P43004 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC1A2P43004 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC1A2P43004 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC1A2P43004 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC1A2P43004 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A2P43004 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC1A2P43004 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A2P43004 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A2P43004 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A2P43004 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A2P43004 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
SLC1A2P43004 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A2P43004 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC1A2P43004 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A2P43004 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A2P43004 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC1A2P43004 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A2P43004 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A2P43004 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A2P43004 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A2P43004 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SLC1A2P43004 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A2P43004 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A2P43004 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A2P43004 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SLC1A2P43004 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A2P43004 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A2P43004 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A2P43004 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC1A2P43004 SNX33P1-201ENST00000592116 1762 ntBASIC16.8■□□□□ 0.28
SLC1A2P43004 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A2P43004 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC1A2P43004 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC1A2P43004 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A2P43004 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A2P43004 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A2P43004 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC1A2P43004 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC1A2P43004 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A2P43004 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC1A2P43004 OR7E14P-202ENST00000530490 1290 ntBASIC16.8■□□□□ 0.28
SLC1A2P43004 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.8■□□□□ 0.28
SLC1A2P43004 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC1A2P43004 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.8■□□□□ 0.28
SLC1A2P43004 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SLC1A2P43004 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC1A2P43004 AL139011.1-202ENST00000642063 584 ntBASIC16.8■□□□□ 0.28
SLC1A2P43004 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A2P43004 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A2P43004 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SLC1A2P43004 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC1A2P43004 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A2P43004 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SLC1A2P43004 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
SLC1A2P43004 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A2P43004 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A2P43004 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
SLC1A2P43004 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SLC1A2P43004 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC1A2P43004 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.79■□□□□ 0.28
SLC1A2P43004 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A2P43004 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A2P43004 AC005052.1-201ENST00000625181 2492 ntBASIC16.79■□□□□ 0.28
SLC1A2P43004 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A2P43004 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A2P43004 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A2P43004 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC1A2P43004 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A2P43004 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SLC1A2P43004 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC1A2P43004 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A2P43004 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms