Protein–RNA interactions for Protein: P33897

ABCD1, ATP-binding cassette sub-family D member 1, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1P33897 AL513477.1-201ENST00000602865 2407 ntBASIC18.41■□□□□ 0.54
ABCD1P33897 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ABCD1P33897 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ABCD1P33897 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ABCD1P33897 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ABCD1P33897 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
ABCD1P33897 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.4■□□□□ 0.54
ABCD1P33897 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.4■□□□□ 0.54
ABCD1P33897 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCD1P33897 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCD1P33897 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.4■□□□□ 0.54
ABCD1P33897 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ABCD1P33897 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCD1P33897 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.4■□□□□ 0.54
ABCD1P33897 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCD1P33897 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCD1P33897 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCD1P33897 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.4■□□□□ 0.54
ABCD1P33897 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.4■□□□□ 0.54
ABCD1P33897 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCD1P33897 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.4■□□□□ 0.54
ABCD1P33897 AC002056.1-201ENST00000395613 760 ntBASIC18.4■□□□□ 0.54
ABCD1P33897 MIR940-201ENST00000401276 94 ntBASIC18.4■□□□□ 0.54
ABCD1P33897 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.4■□□□□ 0.54
ABCD1P33897 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.4■□□□□ 0.54
ABCD1P33897 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.4■□□□□ 0.54
ABCD1P33897 POLD2P1-201ENST00000511220 997 ntBASIC18.4■□□□□ 0.54
ABCD1P33897 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.4■□□□□ 0.54
ABCD1P33897 AC112191.1-201ENST00000523689 701 ntBASIC18.4■□□□□ 0.54
ABCD1P33897 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.4■□□□□ 0.54
ABCD1P33897 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.4■□□□□ 0.54
ABCD1P33897 AL031055.1-201ENST00000606362 631 ntBASIC18.4■□□□□ 0.54
ABCD1P33897 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.4■□□□□ 0.54
ABCD1P33897 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.4■□□□□ 0.54
ABCD1P33897 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCD1P33897 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCD1P33897 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCD1P33897 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ABCD1P33897 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCD1P33897 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ABCD1P33897 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCD1P33897 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
ABCD1P33897 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCD1P33897 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.4■□□□□ 0.54
ABCD1P33897 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCD1P33897 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
ABCD1P33897 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.39■□□□□ 0.54
ABCD1P33897 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
ABCD1P33897 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
ABCD1P33897 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
ABCD1P33897 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ABCD1P33897 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ABCD1P33897 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ABCD1P33897 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ABCD1P33897 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ABCD1P33897 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ABCD1P33897 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ABCD1P33897 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ABCD1P33897 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ABCD1P33897 AP000347.1-202ENST00000435868 847 ntBASIC18.39■□□□□ 0.53
ABCD1P33897 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.39■□□□□ 0.53
ABCD1P33897 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.39■□□□□ 0.53
ABCD1P33897 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
ABCD1P33897 AL161645.1-201ENST00000622716 1255 ntBASIC18.39■□□□□ 0.53
ABCD1P33897 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.39■□□□□ 0.53
ABCD1P33897 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ABCD1P33897 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ABCD1P33897 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ABCD1P33897 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ABCD1P33897 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ABCD1P33897 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ABCD1P33897 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ABCD1P33897 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ABCD1P33897 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ABCD1P33897 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ABCD1P33897 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ABCD1P33897 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
ABCD1P33897 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ABCD1P33897 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ABCD1P33897 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCD1P33897 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCD1P33897 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCD1P33897 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCD1P33897 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCD1P33897 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCD1P33897 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ABCD1P33897 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCD1P33897 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCD1P33897 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ABCD1P33897 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCD1P33897 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCD1P33897 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCD1P33897 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.38■□□□□ 0.53
ABCD1P33897 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.38■□□□□ 0.53
ABCD1P33897 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.38■□□□□ 0.53
ABCD1P33897 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.38■□□□□ 0.53
ABCD1P33897 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ABCD1P33897 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ABCD1P33897 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.38■□□□□ 0.53
ABCD1P33897 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms