Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
NFKB1P19838 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.16■□□□□ 0.34
NFKB1P19838 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NFKB1P19838 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NFKB1P19838 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.16■□□□□ 0.34
NFKB1P19838 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.16■□□□□ 0.34
NFKB1P19838 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NFKB1P19838 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NFKB1P19838 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NFKB1P19838 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NFKB1P19838 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.16■□□□□ 0.34
NFKB1P19838 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.16■□□□□ 0.34
NFKB1P19838 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NFKB1P19838 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NFKB1P19838 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NFKB1P19838 AC108073.2-201ENST00000464002 357 ntBASIC17.16■□□□□ 0.34
NFKB1P19838 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.16■□□□□ 0.34
NFKB1P19838 MPDU1-223ENST00000582151 728 ntBASIC17.16■□□□□ 0.34
NFKB1P19838 PGM5P2-202ENST00000637225 1043 ntBASIC17.16■□□□□ 0.34
NFKB1P19838 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
NFKB1P19838 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NFKB1P19838 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
NFKB1P19838 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NFKB1P19838 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NFKB1P19838 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.16■□□□□ 0.34
NFKB1P19838 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.16■□□□□ 0.34
NFKB1P19838 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.16■□□□□ 0.34
NFKB1P19838 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NFKB1P19838 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NFKB1P19838 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NFKB1P19838 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.15■□□□□ 0.34
NFKB1P19838 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NFKB1P19838 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NFKB1P19838 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NFKB1P19838 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NFKB1P19838 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NFKB1P19838 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
NFKB1P19838 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.15■□□□□ 0.34
NFKB1P19838 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NFKB1P19838 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NFKB1P19838 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
NFKB1P19838 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.15■□□□□ 0.34
NFKB1P19838 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.15■□□□□ 0.34
NFKB1P19838 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
NFKB1P19838 AC009078.2-202ENST00000463353 338 ntBASIC17.15■□□□□ 0.34
NFKB1P19838 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.15■□□□□ 0.34
NFKB1P19838 RNA5SP419-201ENST00000515908 135 ntBASIC17.15■□□□□ 0.34
NFKB1P19838 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.15■□□□□ 0.34
NFKB1P19838 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.15■□□□□ 0.34
NFKB1P19838 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.15■□□□□ 0.34
NFKB1P19838 SLC25A6P4-201ENST00000586535 553 ntBASIC17.15■□□□□ 0.34
NFKB1P19838 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.15■□□□□ 0.34
NFKB1P19838 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.15■□□□□ 0.34
NFKB1P19838 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.15■□□□□ 0.34
NFKB1P19838 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NFKB1P19838 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.15■□□□□ 0.34
NFKB1P19838 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NFKB1P19838 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
NFKB1P19838 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NFKB1P19838 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.15■□□□□ 0.34
NFKB1P19838 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NFKB1P19838 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NFKB1P19838 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
NFKB1P19838 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
NFKB1P19838 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
NFKB1P19838 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NFKB1P19838 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NFKB1P19838 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NFKB1P19838 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NFKB1P19838 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
NFKB1P19838 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NFKB1P19838 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NFKB1P19838 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
NFKB1P19838 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.14■□□□□ 0.33
NFKB1P19838 PMS2P1-201ENST00000431037 1228 ntBASIC17.14■□□□□ 0.33
NFKB1P19838 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.14■□□□□ 0.33
NFKB1P19838 TPM4P1-201ENST00000436100 807 ntBASIC17.14■□□□□ 0.33
NFKB1P19838 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.14■□□□□ 0.33
NFKB1P19838 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.14■□□□□ 0.33
NFKB1P19838 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NFKB1P19838 MIR4492-201ENST00000581627 80 ntBASIC17.14■□□□□ 0.33
NFKB1P19838 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.14■□□□□ 0.33
NFKB1P19838 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
NFKB1P19838 AC004790.2-201ENST00000623588 572 ntBASIC17.14■□□□□ 0.33
NFKB1P19838 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.14■□□□□ 0.33
NFKB1P19838 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NFKB1P19838 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NFKB1P19838 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NFKB1P19838 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NFKB1P19838 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NFKB1P19838 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NFKB1P19838 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NFKB1P19838 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NFKB1P19838 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NFKB1P19838 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NFKB1P19838 PCDHB19P-201ENST00000570871 2371 ntBASIC17.14■□□□□ 0.33
NFKB1P19838 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NFKB1P19838 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
NFKB1P19838 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
NFKB1P19838 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms