Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
HNRNPCL4P0DMR1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HNRNPCL4P0DMR1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HNRNPCL4P0DMR1 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HNRNPCL4P0DMR1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HNRNPCL4P0DMR1 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HNRNPCL4P0DMR1 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.71■□□□□ 0.1
HNRNPCL4P0DMR1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
HNRNPCL4P0DMR1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HNRNPCL4P0DMR1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
HNRNPCL4P0DMR1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HNRNPCL4P0DMR1 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 AC006277.1-201ENST00000624348 1610 ntBASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 UPK3BP1-201ENST00000428678 509 ntBASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 AL355877.3-201ENST00000622820 899 ntBASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 AC006449.5-201ENST00000610658 2098 ntBASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HNRNPCL4P0DMR1 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 MIR1224-201ENST00000408193 85 ntBASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 KRT18P31-201ENST00000506277 1292 ntBASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 AC139887.3-201ENST00000568585 713 ntBASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 TOP3BP1-201ENST00000420768 1380 ntBASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 DOC2GP-204ENST00000639052 2548 ntBASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HNRNPCL4P0DMR1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms