Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 NCF1C-201ENST00000438382 1427 ntBASIC18.29■□□□□ 0.52
CCDC172P0C7W6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 AC005052.1-201ENST00000625181 2492 ntBASIC18.29■□□□□ 0.52
CCDC172P0C7W6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCDC172P0C7W6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 RBM17P3-201ENST00000417687 1192 ntBASIC18.28■□□□□ 0.52
CCDC172P0C7W6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 AC132008.2-207ENST00000454517 770 ntBASIC18.28■□□□□ 0.52
CCDC172P0C7W6 AC106795.1-205ENST00000512851 1056 ntBASIC18.28■□□□□ 0.52
CCDC172P0C7W6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 AC138894.3-201ENST00000603787 634 ntBASIC18.28■□□□□ 0.52
CCDC172P0C7W6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.28■□□□□ 0.52
CCDC172P0C7W6 AL022326.1-202ENST00000641533 845 ntBASIC18.28■□□□□ 0.52
CCDC172P0C7W6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC172P0C7W6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC172P0C7W6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms