Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 SPDYE8P-202ENST00000612377 668 ntBASIC18.88■□□□□ 0.61
CYP3A4P08684 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CYP3A4P08684 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CYP3A4P08684 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CYP3A4P08684 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.88■□□□□ 0.61
CYP3A4P08684 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP3A4P08684 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CYP3A4P08684 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CYP3A4P08684 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP3A4P08684 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CYP3A4P08684 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CYP3A4P08684 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
CYP3A4P08684 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CYP3A4P08684 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP3A4P08684 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP3A4P08684 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.88■□□□□ 0.61
CYP3A4P08684 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP3A4P08684 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP3A4P08684 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CYP3A4P08684 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CYP3A4P08684 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CYP3A4P08684 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CYP3A4P08684 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CYP3A4P08684 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CYP3A4P08684 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CYP3A4P08684 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CYP3A4P08684 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
CYP3A4P08684 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
CYP3A4P08684 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.87■□□□□ 0.61
CYP3A4P08684 CNN2P11-201ENST00000429351 262 ntBASIC18.87■□□□□ 0.61
CYP3A4P08684 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.87■□□□□ 0.61
CYP3A4P08684 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.87■□□□□ 0.61
CYP3A4P08684 AC079140.1-201ENST00000508039 487 ntBASIC18.87■□□□□ 0.61
CYP3A4P08684 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.87■□□□□ 0.61
CYP3A4P08684 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CYP3A4P08684 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CYP3A4P08684 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.87■□□□□ 0.61
CYP3A4P08684 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CYP3A4P08684 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CYP3A4P08684 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.87■□□□□ 0.61
CYP3A4P08684 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.87■□□□□ 0.61
CYP3A4P08684 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
CYP3A4P08684 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CYP3A4P08684 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CYP3A4P08684 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.86■□□□□ 0.61
CYP3A4P08684 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CYP3A4P08684 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CYP3A4P08684 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CYP3A4P08684 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CYP3A4P08684 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CYP3A4P08684 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CYP3A4P08684 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.86■□□□□ 0.61
CYP3A4P08684 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CYP3A4P08684 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CYP3A4P08684 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.86■□□□□ 0.61
CYP3A4P08684 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.86■□□□□ 0.61
CYP3A4P08684 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.86■□□□□ 0.61
CYP3A4P08684 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.86■□□□□ 0.61
CYP3A4P08684 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CYP3A4P08684 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.86■□□□□ 0.61
CYP3A4P08684 TIMM8BP1-201ENST00000452384 211 ntBASIC18.86■□□□□ 0.61
CYP3A4P08684 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.86■□□□□ 0.61
CYP3A4P08684 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CYP3A4P08684 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.86■□□□□ 0.61
CYP3A4P08684 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CYP3A4P08684 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CYP3A4P08684 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.86■□□□□ 0.61
CYP3A4P08684 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.86■□□□□ 0.61
CYP3A4P08684 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.86■□□□□ 0.61
CYP3A4P08684 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.86■□□□□ 0.61
CYP3A4P08684 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.86■□□□□ 0.61
CYP3A4P08684 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CYP3A4P08684 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.86■□□□□ 0.61
CYP3A4P08684 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CYP3A4P08684 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CYP3A4P08684 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CYP3A4P08684 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CYP3A4P08684 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CYP3A4P08684 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CYP3A4P08684 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CYP3A4P08684 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CYP3A4P08684 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CYP3A4P08684 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.86■□□□□ 0.61
CYP3A4P08684 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.86■□□□□ 0.61
CYP3A4P08684 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CYP3A4P08684 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.85■□□□□ 0.61
CYP3A4P08684 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CYP3A4P08684 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CYP3A4P08684 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.85■□□□□ 0.61
CYP3A4P08684 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.85■□□□□ 0.61
CYP3A4P08684 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CYP3A4P08684 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CYP3A4P08684 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.85■□□□□ 0.61
CYP3A4P08684 SPCS2P4-201ENST00000436160 681 ntBASIC18.85■□□□□ 0.61
CYP3A4P08684 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.85■□□□□ 0.61
CYP3A4P08684 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.85■□□□□ 0.61
CYP3A4P08684 SNHG9-202ENST00000564014 471 ntBASIC18.85■□□□□ 0.61
CYP3A4P08684 AC004835.2-201ENST00000603762 682 ntBASIC18.85■□□□□ 0.61
CYP3A4P08684 AL596442.2-201ENST00000610240 980 ntBASIC18.85■□□□□ 0.61
CYP3A4P08684 AC084121.4-201ENST00000641598 221 ntBASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms