Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND3P03897 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
MT-ND3P03897 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND3P03897 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
MT-ND3P03897 AC122714.2-201ENST00000502787 707 ntBASIC17.25■□□□□ 0.35
MT-ND3P03897 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.25■□□□□ 0.35
MT-ND3P03897 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.25■□□□□ 0.35
MT-ND3P03897 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND3P03897 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.25■□□□□ 0.35
MT-ND3P03897 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.25■□□□□ 0.35
MT-ND3P03897 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.25■□□□□ 0.35
MT-ND3P03897 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.25■□□□□ 0.35
MT-ND3P03897 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.25■□□□□ 0.35
MT-ND3P03897 AL353801.3-201ENST00000609898 542 ntBASIC17.25■□□□□ 0.35
MT-ND3P03897 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.25■□□□□ 0.35
MT-ND3P03897 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND3P03897 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.25■□□□□ 0.35
MT-ND3P03897 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND3P03897 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.25■□□□□ 0.35
MT-ND3P03897 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND3P03897 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.25■□□□□ 0.35
MT-ND3P03897 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.25■□□□□ 0.35
MT-ND3P03897 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
MT-ND3P03897 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND3P03897 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.25■□□□□ 0.35
MT-ND3P03897 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
MT-ND3P03897 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
MT-ND3P03897 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.25■□□□□ 0.35
MT-ND3P03897 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND3P03897 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND3P03897 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
MT-ND3P03897 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND3P03897 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND3P03897 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND3P03897 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.24■□□□□ 0.35
MT-ND3P03897 AL049757.1-201ENST00000616842 1596 ntBASIC17.24■□□□□ 0.35
MT-ND3P03897 PKD1P5-201ENST00000532415 10291 ntBASIC17.24■□□□□ 0.35
MT-ND3P03897 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND3P03897 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND3P03897 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.24■□□□□ 0.35
MT-ND3P03897 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
MT-ND3P03897 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
MT-ND3P03897 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND3P03897 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND3P03897 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.24■□□□□ 0.35
MT-ND3P03897 AC103564.2-201ENST00000432853 1299 ntBASIC17.24■□□□□ 0.35
MT-ND3P03897 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.24■□□□□ 0.35
MT-ND3P03897 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.24■□□□□ 0.35
MT-ND3P03897 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.24■□□□□ 0.35
MT-ND3P03897 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
MT-ND3P03897 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND3P03897 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND3P03897 AL662844.1-201ENST00000546340 181 ntBASIC17.24■□□□□ 0.35
MT-ND3P03897 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.24■□□□□ 0.35
MT-ND3P03897 AL031008.1-201ENST00000619963 541 ntBASIC17.24■□□□□ 0.35
MT-ND3P03897 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.24■□□□□ 0.35
MT-ND3P03897 FRMD8P1-201ENST00000440433 1524 ntBASIC17.24■□□□□ 0.35
MT-ND3P03897 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND3P03897 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND3P03897 AL513523.2-202ENST00000427283 2040 ntBASIC17.24■□□□□ 0.35
MT-ND3P03897 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND3P03897 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
MT-ND3P03897 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND3P03897 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
MT-ND3P03897 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.24■□□□□ 0.35
MT-ND3P03897 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND3P03897 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND3P03897 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND3P03897 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND3P03897 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.24■□□□□ 0.35
MT-ND3P03897 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND3P03897 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND3P03897 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.24■□□□□ 0.35
MT-ND3P03897 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND3P03897 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND3P03897 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND3P03897 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.24■□□□□ 0.35
MT-ND3P03897 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND3P03897 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
MT-ND3P03897 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND3P03897 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.23■□□□□ 0.35
MT-ND3P03897 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND3P03897 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND3P03897 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND3P03897 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND3P03897 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.23■□□□□ 0.35
MT-ND3P03897 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.23■□□□□ 0.35
MT-ND3P03897 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
MT-ND3P03897 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.23■□□□□ 0.35
MT-ND3P03897 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND3P03897 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND3P03897 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.23■□□□□ 0.35
MT-ND3P03897 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.23■□□□□ 0.35
MT-ND3P03897 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.23■□□□□ 0.35
MT-ND3P03897 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.23■□□□□ 0.35
MT-ND3P03897 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.23■□□□□ 0.35
MT-ND3P03897 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
MT-ND3P03897 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.23■□□□□ 0.35
MT-ND3P03897 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND3P03897 STK25P1-201ENST00000585406 838 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms