Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRUB2O95900 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRUB2O95900 TOP3BP1-201ENST00000420768 1380 ntBASIC17.66■□□□□ 0.42
TRUB2O95900 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.66■□□□□ 0.42
TRUB2O95900 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRUB2O95900 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRUB2O95900 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.66■□□□□ 0.42
TRUB2O95900 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRUB2O95900 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.66■□□□□ 0.42
TRUB2O95900 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.66■□□□□ 0.42
TRUB2O95900 LINC00895-201ENST00000629028 1637 ntBASIC17.66■□□□□ 0.42
TRUB2O95900 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRUB2O95900 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRUB2O95900 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRUB2O95900 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRUB2O95900 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRUB2O95900 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.66■□□□□ 0.42
TRUB2O95900 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.66■□□□□ 0.42
TRUB2O95900 POLD2P1-201ENST00000511220 997 ntBASIC17.66■□□□□ 0.42
TRUB2O95900 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.66■□□□□ 0.42
TRUB2O95900 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.66■□□□□ 0.42
TRUB2O95900 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.66■□□□□ 0.42
TRUB2O95900 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRUB2O95900 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRUB2O95900 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.66■□□□□ 0.42
TRUB2O95900 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRUB2O95900 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRUB2O95900 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.66■□□□□ 0.42
TRUB2O95900 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRUB2O95900 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRUB2O95900 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRUB2O95900 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRUB2O95900 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRUB2O95900 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.66■□□□□ 0.42
TRUB2O95900 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRUB2O95900 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.66■□□□□ 0.42
TRUB2O95900 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRUB2O95900 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.65■□□□□ 0.42
TRUB2O95900 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRUB2O95900 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRUB2O95900 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRUB2O95900 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRUB2O95900 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRUB2O95900 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.65■□□□□ 0.42
TRUB2O95900 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.65■□□□□ 0.42
TRUB2O95900 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
TRUB2O95900 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TRUB2O95900 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
TRUB2O95900 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.65■□□□□ 0.42
TRUB2O95900 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.65■□□□□ 0.42
TRUB2O95900 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
TRUB2O95900 RNA5SP416-201ENST00000516838 111 ntBASIC17.65■□□□□ 0.42
TRUB2O95900 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRUB2O95900 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.65■□□□□ 0.42
TRUB2O95900 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.65■□□□□ 0.42
TRUB2O95900 ACTL9-202ENST00000612068 1252 ntBASIC17.65■□□□□ 0.42
TRUB2O95900 AC010507.1-201ENST00000633895 436 ntBASIC17.65■□□□□ 0.42
TRUB2O95900 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
TRUB2O95900 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRUB2O95900 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
TRUB2O95900 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.65■□□□□ 0.42
TRUB2O95900 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.65■□□□□ 0.42
TRUB2O95900 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.65■□□□□ 0.42
TRUB2O95900 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
TRUB2O95900 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRUB2O95900 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRUB2O95900 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRUB2O95900 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.65■□□□□ 0.42
TRUB2O95900 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRUB2O95900 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRUB2O95900 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.65■□□□□ 0.42
TRUB2O95900 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRUB2O95900 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRUB2O95900 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.64■□□□□ 0.42
TRUB2O95900 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRUB2O95900 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.64■□□□□ 0.42
TRUB2O95900 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRUB2O95900 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TRUB2O95900 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRUB2O95900 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRUB2O95900 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRUB2O95900 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRUB2O95900 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
TRUB2O95900 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRUB2O95900 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.64■□□□□ 0.41
TRUB2O95900 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.64■□□□□ 0.41
TRUB2O95900 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.64■□□□□ 0.41
TRUB2O95900 AC096734.2-201ENST00000562054 433 ntBASIC17.64■□□□□ 0.41
TRUB2O95900 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRUB2O95900 AC018845.2-201ENST00000568326 409 ntBASIC17.64■□□□□ 0.41
TRUB2O95900 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRUB2O95900 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.64■□□□□ 0.41
TRUB2O95900 HLA-A-202ENST00000376806 1854 ntBASIC17.64■□□□□ 0.41
TRUB2O95900 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRUB2O95900 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.64■□□□□ 0.41
TRUB2O95900 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRUB2O95900 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRUB2O95900 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRUB2O95900 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRUB2O95900 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms