Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SNCGO76070 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SNCGO76070 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SNCGO76070 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC11.39□□□□□ -0.59
SNCGO76070 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC11.39□□□□□ -0.59
SNCGO76070 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SNCGO76070 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC11.39□□□□□ -0.59
SNCGO76070 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SNCGO76070 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SNCGO76070 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SNCGO76070 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SNCGO76070 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SNCGO76070 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC11.39□□□□□ -0.59
SNCGO76070 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SNCGO76070 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC11.39□□□□□ -0.59
SNCGO76070 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC11.38□□□□□ -0.59
SNCGO76070 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SNCGO76070 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC11.38□□□□□ -0.59
SNCGO76070 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SNCGO76070 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
SNCGO76070 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
SNCGO76070 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
SNCGO76070 AC005252.3-201ENST00000623855 2258 ntBASIC11.38□□□□□ -0.59
SNCGO76070 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
SNCGO76070 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC11.38□□□□□ -0.59
SNCGO76070 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC11.38□□□□□ -0.59
SNCGO76070 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC11.38□□□□□ -0.59
SNCGO76070 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SNCGO76070 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC11.38□□□□□ -0.59
SNCGO76070 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC11.38□□□□□ -0.59
SNCGO76070 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC11.38□□□□□ -0.59
SNCGO76070 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
SNCGO76070 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC11.38□□□□□ -0.59
SNCGO76070 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC11.38□□□□□ -0.59
SNCGO76070 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC11.38□□□□□ -0.59
SNCGO76070 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 AC016769.1-201ENST00000409132 1010 ntBASIC11.38□□□□□ -0.59
SNCGO76070 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC11.38□□□□□ -0.59
SNCGO76070 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC11.38□□□□□ -0.59
SNCGO76070 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SNCGO76070 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC11.38□□□□□ -0.59
SNCGO76070 AC137761.2-201ENST00000561729 223 ntBASIC11.38□□□□□ -0.59
SNCGO76070 AC145350.3-201ENST00000569033 163 ntBASIC11.38□□□□□ -0.59
SNCGO76070 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC11.38□□□□□ -0.59
SNCGO76070 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC11.38□□□□□ -0.59
SNCGO76070 AL031432.3-201ENST00000607698 485 ntBASIC11.38□□□□□ -0.59
SNCGO76070 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC11.38□□□□□ -0.59
SNCGO76070 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC11.38□□□□□ -0.59
SNCGO76070 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC11.38□□□□□ -0.59
SNCGO76070 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC11.38□□□□□ -0.59
SNCGO76070 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
SNCGO76070 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNCGO76070 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC11.38□□□□□ -0.59
SNCGO76070 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SNCGO76070 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC11.37□□□□□ -0.59
SNCGO76070 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
SNCGO76070 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNCGO76070 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
SNCGO76070 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SNCGO76070 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNCGO76070 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNCGO76070 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNCGO76070 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SNCGO76070 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC11.37□□□□□ -0.59
SNCGO76070 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC11.37□□□□□ -0.59
SNCGO76070 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNCGO76070 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNCGO76070 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SNCGO76070 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
SNCGO76070 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNCGO76070 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC11.37□□□□□ -0.59
SNCGO76070 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
SNCGO76070 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
SNCGO76070 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC11.37□□□□□ -0.59
SNCGO76070 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms