Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLPXO76031 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLPXO76031 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CLPXO76031 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLPXO76031 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.38■□□□□ 0.05
CLPXO76031 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLPXO76031 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLPXO76031 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
CLPXO76031 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLPXO76031 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLPXO76031 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLPXO76031 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLPXO76031 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLPXO76031 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.38■□□□□ 0.05
CLPXO76031 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CLPXO76031 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLPXO76031 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CLPXO76031 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLPXO76031 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLPXO76031 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLPXO76031 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.38■□□□□ 0.05
CLPXO76031 AC007663.1-201ENST00000438948 1240 ntBASIC15.38■□□□□ 0.05
CLPXO76031 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.38■□□□□ 0.05
CLPXO76031 AC104076.2-201ENST00000448912 469 ntBASIC15.38■□□□□ 0.05
CLPXO76031 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLPXO76031 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
CLPXO76031 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.38■□□□□ 0.05
CLPXO76031 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.38■□□□□ 0.05
CLPXO76031 MIR3180-5-201ENST00000583743 153 ntBASIC15.38■□□□□ 0.05
CLPXO76031 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLPXO76031 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLPXO76031 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.38■□□□□ 0.05
CLPXO76031 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.38■□□□□ 0.05
CLPXO76031 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLPXO76031 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLPXO76031 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLPXO76031 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CLPXO76031 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLPXO76031 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.38■□□□□ 0.05
CLPXO76031 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.38■□□□□ 0.05
CLPXO76031 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.38■□□□□ 0.05
CLPXO76031 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CLPXO76031 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CLPXO76031 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLPXO76031 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPXO76031 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPXO76031 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CLPXO76031 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.37■□□□□ 0.05
CLPXO76031 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CLPXO76031 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CLPXO76031 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPXO76031 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CLPXO76031 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLPXO76031 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPXO76031 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPXO76031 AL603832.2-201ENST00000566195 2125 ntBASIC15.37■□□□□ 0.05
CLPXO76031 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.37■□□□□ 0.05
CLPXO76031 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.37■□□□□ 0.05
CLPXO76031 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPXO76031 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.37■□□□□ 0.05
CLPXO76031 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPXO76031 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.37■□□□□ 0.05
CLPXO76031 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.37■□□□□ 0.05
CLPXO76031 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPXO76031 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLPXO76031 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPXO76031 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.37■□□□□ 0.05
CLPXO76031 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPXO76031 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLPXO76031 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.37■□□□□ 0.05
CLPXO76031 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CLPXO76031 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.37■□□□□ 0.05
CLPXO76031 ATP5G1P1-201ENST00000448724 379 ntBASIC15.37■□□□□ 0.05
CLPXO76031 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CLPXO76031 NTF6B-201ENST00000591913 560 ntBASIC15.37■□□□□ 0.05
CLPXO76031 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPXO76031 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CLPXO76031 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPXO76031 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPXO76031 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPXO76031 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLPXO76031 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLPXO76031 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPXO76031 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPXO76031 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.37■□□□□ 0.05
CLPXO76031 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.37■□□□□ 0.05
CLPXO76031 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.37■□□□□ 0.05
CLPXO76031 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPXO76031 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.37■□□□□ 0.05
CLPXO76031 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPXO76031 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLPXO76031 AC068587.6-202ENST00000641839 5619 ntBASIC15.37■□□□□ 0.05
CLPXO76031 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.36■□□□□ 0.05
CLPXO76031 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLPXO76031 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPXO76031 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPXO76031 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CLPXO76031 KRT8P7-201ENST00000533003 1432 ntBASIC15.36■□□□□ 0.05
CLPXO76031 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPXO76031 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms