Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC4O75487 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
GPC4O75487 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
GPC4O75487 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC4O75487 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC4O75487 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.96■□□□□ 0.31
GPC4O75487 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GPC4O75487 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC4O75487 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GPC4O75487 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC4O75487 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GPC4O75487 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC4O75487 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC4O75487 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
GPC4O75487 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GPC4O75487 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
GPC4O75487 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC4O75487 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC4O75487 AC004870.1-201ENST00000315132 882 ntBASIC16.96■□□□□ 0.31
GPC4O75487 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GPC4O75487 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.96■□□□□ 0.31
GPC4O75487 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GPC4O75487 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC4O75487 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.96■□□□□ 0.31
GPC4O75487 FAAHP1-202ENST00000446499 1238 ntBASIC16.96■□□□□ 0.31
GPC4O75487 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.96■□□□□ 0.31
GPC4O75487 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.96■□□□□ 0.31
GPC4O75487 AC021087.4-201ENST00000563761 564 ntBASIC16.96■□□□□ 0.31
GPC4O75487 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GPC4O75487 MTDHP4-201ENST00000600287 670 ntBASIC16.96■□□□□ 0.31
GPC4O75487 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
GPC4O75487 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.96■□□□□ 0.31
GPC4O75487 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
GPC4O75487 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC4O75487 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC4O75487 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
GPC4O75487 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.96■□□□□ 0.31
GPC4O75487 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC4O75487 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.96■□□□□ 0.31
GPC4O75487 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
GPC4O75487 FLJ38576-201ENST00000623820 2459 ntBASIC16.96■□□□□ 0.31
GPC4O75487 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.96■□□□□ 0.31
GPC4O75487 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.96■□□□□ 0.31
GPC4O75487 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC4O75487 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC4O75487 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
GPC4O75487 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GPC4O75487 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.96■□□□□ 0.3
GPC4O75487 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
GPC4O75487 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
GPC4O75487 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
GPC4O75487 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC4O75487 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC4O75487 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC4O75487 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.95■□□□□ 0.3
GPC4O75487 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.95■□□□□ 0.3
GPC4O75487 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC4O75487 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC4O75487 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GPC4O75487 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC4O75487 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GPC4O75487 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC4O75487 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC4O75487 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC4O75487 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC4O75487 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.95■□□□□ 0.3
GPC4O75487 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.95■□□□□ 0.3
GPC4O75487 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GPC4O75487 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.95■□□□□ 0.3
GPC4O75487 LINC00982-205ENST00000420957 435 ntBASIC16.95■□□□□ 0.3
GPC4O75487 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.95■□□□□ 0.3
GPC4O75487 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GPC4O75487 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.95■□□□□ 0.3
GPC4O75487 AC064862.7-201ENST00000604520 867 ntBASIC16.95■□□□□ 0.3
GPC4O75487 AC025062.2-201ENST00000605477 670 ntBASIC16.95■□□□□ 0.3
GPC4O75487 TP73-AS1-207ENST00000624167 988 ntBASIC16.95■□□□□ 0.3
GPC4O75487 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GPC4O75487 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC4O75487 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GPC4O75487 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.95■□□□□ 0.3
GPC4O75487 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.95■□□□□ 0.3
GPC4O75487 LINC02012-201ENST00000608206 1725 ntBASIC16.95■□□□□ 0.3
GPC4O75487 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GPC4O75487 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC4O75487 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC4O75487 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
GPC4O75487 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.95■□□□□ 0.3
GPC4O75487 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
GPC4O75487 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC4O75487 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.95■□□□□ 0.3
GPC4O75487 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.95■□□□□ 0.3
GPC4O75487 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.95■□□□□ 0.3
GPC4O75487 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC4O75487 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC4O75487 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC4O75487 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC4O75487 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC4O75487 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC4O75487 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC4O75487 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms