Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.16■□□□□ 0.18
PRICKLE3O43900 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.16■□□□□ 0.18
PRICKLE3O43900 U1.21-201ENST00000580816 167 ntBASIC16.16■□□□□ 0.18
PRICKLE3O43900 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.16■□□□□ 0.18
PRICKLE3O43900 AC068137.2-201ENST00000605408 478 ntBASIC16.16■□□□□ 0.18
PRICKLE3O43900 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
PRICKLE3O43900 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.16■□□□□ 0.18
PRICKLE3O43900 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PRICKLE3O43900 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE3O43900 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.16■□□□□ 0.18
PRICKLE3O43900 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE3O43900 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE3O43900 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
PRICKLE3O43900 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PRICKLE3O43900 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE3O43900 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.16■□□□□ 0.18
PRICKLE3O43900 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE3O43900 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE3O43900 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE3O43900 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.15■□□□□ 0.18
PRICKLE3O43900 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
PRICKLE3O43900 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.15■□□□□ 0.18
PRICKLE3O43900 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.15■□□□□ 0.18
PRICKLE3O43900 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
PRICKLE3O43900 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PRICKLE3O43900 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.15■□□□□ 0.18
PRICKLE3O43900 BX842568.4-201ENST00000421222 227 ntBASIC16.15■□□□□ 0.18
PRICKLE3O43900 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.15■□□□□ 0.18
PRICKLE3O43900 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
PRICKLE3O43900 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.15■□□□□ 0.18
PRICKLE3O43900 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.15■□□□□ 0.18
PRICKLE3O43900 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 MIR3909-201ENST00000579518 119 ntBASIC16.15■□□□□ 0.18
PRICKLE3O43900 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.15■□□□□ 0.18
PRICKLE3O43900 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.15■□□□□ 0.18
PRICKLE3O43900 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PRICKLE3O43900 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PRICKLE3O43900 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRICKLE3O43900 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
PRICKLE3O43900 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
PRICKLE3O43900 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PRICKLE3O43900 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PRICKLE3O43900 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRICKLE3O43900 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.14■□□□□ 0.17
PRICKLE3O43900 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.14■□□□□ 0.17
PRICKLE3O43900 AC106886.4-201ENST00000623557 2502 ntBASIC16.14■□□□□ 0.17
PRICKLE3O43900 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.14■□□□□ 0.17
PRICKLE3O43900 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PRICKLE3O43900 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRICKLE3O43900 KRT8P39-201ENST00000396270 1433 ntBASIC16.14■□□□□ 0.17
PRICKLE3O43900 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PRICKLE3O43900 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PRICKLE3O43900 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PRICKLE3O43900 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PRICKLE3O43900 RPSAP43-201ENST00000402237 625 ntBASIC16.14■□□□□ 0.17
PRICKLE3O43900 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.14■□□□□ 0.17
PRICKLE3O43900 AC112482.1-201ENST00000492080 688 ntBASIC16.14■□□□□ 0.17
PRICKLE3O43900 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.14■□□□□ 0.17
PRICKLE3O43900 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.14■□□□□ 0.17
PRICKLE3O43900 AL009183.1-201ENST00000603760 355 ntBASIC16.14■□□□□ 0.17
PRICKLE3O43900 C20orf181-201ENST00000623918 480 ntBASIC16.14■□□□□ 0.17
PRICKLE3O43900 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PRICKLE3O43900 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PRICKLE3O43900 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PRICKLE3O43900 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRICKLE3O43900 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRICKLE3O43900 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
PRICKLE3O43900 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRICKLE3O43900 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PRICKLE3O43900 AL603756.1-201ENST00000606511 2163 ntBASIC16.14■□□□□ 0.17
PRICKLE3O43900 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.14■□□□□ 0.17
PRICKLE3O43900 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
PRICKLE3O43900 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PRICKLE3O43900 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms