Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00473A8K010 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00473A8K010 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00473A8K010 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00473A8K010 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00473A8K010 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LINC00473A8K010 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.75□□□□□ -0.21
LINC00473A8K010 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00473A8K010 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00473A8K010 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00473A8K010 AC013467.2-201ENST00000605472 835 ntBASIC13.75□□□□□ -0.21
LINC00473A8K010 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00473A8K010 AL139288.1-201ENST00000623748 933 ntBASIC13.75□□□□□ -0.21
LINC00473A8K010 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LINC00473A8K010 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00473A8K010 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00473A8K010 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00473A8K010 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00473A8K010 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00473A8K010 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00473A8K010 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00473A8K010 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00473A8K010 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00473A8K010 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LINC00473A8K010 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00473A8K010 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00473A8K010 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00473A8K010 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
LINC00473A8K010 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00473A8K010 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00473A8K010 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00473A8K010 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00473A8K010 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00473A8K010 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00473A8K010 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00473A8K010 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
LINC00473A8K010 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00473A8K010 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00473A8K010 AC046158.3-201ENST00000624947 2558 ntBASIC13.75□□□□□ -0.21
LINC00473A8K010 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LINC00473A8K010 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00473A8K010 AL513523.2-202ENST00000427283 2040 ntBASIC13.74□□□□□ -0.21
LINC00473A8K010 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.74□□□□□ -0.21
LINC00473A8K010 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00473A8K010 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00473A8K010 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LINC00473A8K010 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
LINC00473A8K010 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LINC00473A8K010 RBM17P3-201ENST00000417687 1192 ntBASIC13.74□□□□□ -0.21
LINC00473A8K010 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.74□□□□□ -0.21
LINC00473A8K010 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.74□□□□□ -0.21
LINC00473A8K010 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00473A8K010 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.74□□□□□ -0.21
LINC00473A8K010 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.74□□□□□ -0.21
LINC00473A8K010 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.74□□□□□ -0.21
LINC00473A8K010 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00473A8K010 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
LINC00473A8K010 AL139424.1-201ENST00000607572 797 ntBASIC13.74□□□□□ -0.21
LINC00473A8K010 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LINC00473A8K010 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
LINC00473A8K010 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.74□□□□□ -0.21
LINC00473A8K010 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
LINC00473A8K010 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LINC00473A8K010 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00473A8K010 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC00473A8K010 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00473A8K010 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00473A8K010 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00473A8K010 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LINC00473A8K010 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00473A8K010 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00473A8K010 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00473A8K010 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00473A8K010 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00473A8K010 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00473A8K010 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms