Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 MIR663A-201ENST00000385250 93 ntBASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 AC008687.5-201ENST00000593746 558 ntBASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHTOPQ9Y3Y2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHTOPQ9Y3Y2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHTOPQ9Y3Y2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHTOPQ9Y3Y2 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHTOPQ9Y3Y2 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHTOPQ9Y3Y2 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHTOPQ9Y3Y2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.21□□□□□ -0.46
CHTOPQ9Y3Y2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
CHTOPQ9Y3Y2 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
CHTOPQ9Y3Y2 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CHTOPQ9Y3Y2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHTOPQ9Y3Y2 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHTOPQ9Y3Y2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.21□□□□□ -0.46
CHTOPQ9Y3Y2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHTOPQ9Y3Y2 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHTOPQ9Y3Y2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CHTOPQ9Y3Y2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHTOPQ9Y3Y2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHTOPQ9Y3Y2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHTOPQ9Y3Y2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 SLC29A4P1-201ENST00000398760 971 ntBASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 AC008040.2-201ENST00000461049 708 ntBASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 AP002982.1-201ENST00000492365 877 ntBASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 AC087623.3-201ENST00000607047 1098 ntBASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 ABBA01031674.1-201ENST00000635145 728 ntBASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 AC106881.1-201ENST00000605849 3329 ntBASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 AC092117.1-201ENST00000621230 3250 ntBASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms