Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 MIR574-201ENST00000385209 96 ntBASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 MED15P5-201ENST00000423150 992 ntBASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 AC131009.4-201ENST00000624048 1740 ntBASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
DTX4Q9Y2E6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 MIR940-201ENST00000401276 94 ntBASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 MIR4492-201ENST00000581627 80 ntBASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 AL671710.1-201ENST00000610245 2349 ntBASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 AC006277.1-201ENST00000624348 1610 ntBASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 AL353732.1-201ENST00000569618 1459 ntBASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
DTX4Q9Y2E6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 POLD2P1-201ENST00000511220 997 ntBASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 AC091167.2-201ENST00000579581 588 ntBASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 AC027601.4-201ENST00000611259 610 ntBASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
DTX4Q9Y2E6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms