Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
LRIT1Q9P2V4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT1Q9P2V4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT1Q9P2V4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.27■□□□□ 0.2
LRIT1Q9P2V4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
LRIT1Q9P2V4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.27■□□□□ 0.2
LRIT1Q9P2V4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT1Q9P2V4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
LRIT1Q9P2V4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.27■□□□□ 0.2
LRIT1Q9P2V4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.27■□□□□ 0.2
LRIT1Q9P2V4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.27■□□□□ 0.2
LRIT1Q9P2V4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT1Q9P2V4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT1Q9P2V4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT1Q9P2V4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT1Q9P2V4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.27■□□□□ 0.2
LRIT1Q9P2V4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.27■□□□□ 0.2
LRIT1Q9P2V4 SPCS2P1-201ENST00000561636 679 ntBASIC16.27■□□□□ 0.2
LRIT1Q9P2V4 LINC01225-203ENST00000563550 1244 ntBASIC16.27■□□□□ 0.2
LRIT1Q9P2V4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT1Q9P2V4 AC015911.4-201ENST00000588022 1070 ntBASIC16.27■□□□□ 0.2
LRIT1Q9P2V4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.27■□□□□ 0.2
LRIT1Q9P2V4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT1Q9P2V4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.27■□□□□ 0.19
LRIT1Q9P2V4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LRIT1Q9P2V4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
LRIT1Q9P2V4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.27■□□□□ 0.19
LRIT1Q9P2V4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.27■□□□□ 0.19
LRIT1Q9P2V4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LRIT1Q9P2V4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRIT1Q9P2V4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRIT1Q9P2V4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 CNN2P2-201ENST00000443536 909 ntBASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 CNN2P3-201ENST00000450201 906 ntBASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 MIR3909-201ENST00000579518 119 ntBASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 AL136317.3-201ENST00000618497 906 ntBASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRIT1Q9P2V4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 GPS2P2-201ENST00000430745 888 ntBASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 AL512356.2-201ENST00000546955 174 ntBASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 AP001059.3-201ENST00000619053 235 ntBASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms