Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.54■□□□□ 0.08
UBQLN4Q9NRR5 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.54■□□□□ 0.08
UBQLN4Q9NRR5 AL121894.2-201ENST00000602977 491 ntBASIC15.54■□□□□ 0.08
UBQLN4Q9NRR5 AC013467.2-201ENST00000605472 835 ntBASIC15.54■□□□□ 0.08
UBQLN4Q9NRR5 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN4Q9NRR5 AC010654.1-201ENST00000615722 808 ntBASIC15.54■□□□□ 0.08
UBQLN4Q9NRR5 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN4Q9NRR5 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN4Q9NRR5 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
UBQLN4Q9NRR5 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN4Q9NRR5 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN4Q9NRR5 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN4Q9NRR5 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
UBQLN4Q9NRR5 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN4Q9NRR5 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.54■□□□□ 0.08
UBQLN4Q9NRR5 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN4Q9NRR5 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
UBQLN4Q9NRR5 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
UBQLN4Q9NRR5 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN4Q9NRR5 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN4Q9NRR5 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.54■□□□□ 0.08
UBQLN4Q9NRR5 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN4Q9NRR5 AC006277.1-201ENST00000624348 1610 ntBASIC15.54■□□□□ 0.08
UBQLN4Q9NRR5 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 FDX1P1-201ENST00000449115 551 ntBASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 UNC93B6-202ENST00000528242 690 ntBASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 AC107918.2-201ENST00000530817 355 ntBASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 AC005412.3-201ENST00000580309 715 ntBASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 MPDU1-223ENST00000582151 728 ntBASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.53■□□□□ 0.08
UBQLN4Q9NRR5 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
UBQLN4Q9NRR5 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBQLN4Q9NRR5 AL353732.1-201ENST00000569618 1459 ntBASIC15.52■□□□□ 0.08
UBQLN4Q9NRR5 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBQLN4Q9NRR5 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBQLN4Q9NRR5 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.52■□□□□ 0.08
UBQLN4Q9NRR5 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.52■□□□□ 0.08
UBQLN4Q9NRR5 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UBQLN4Q9NRR5 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.52■□□□□ 0.08
UBQLN4Q9NRR5 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.52■□□□□ 0.08
UBQLN4Q9NRR5 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.52■□□□□ 0.08
UBQLN4Q9NRR5 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
UBQLN4Q9NRR5 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBQLN4Q9NRR5 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBQLN4Q9NRR5 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
UBQLN4Q9NRR5 RNA5SP415-201ENST00000517246 115 ntBASIC15.52■□□□□ 0.08
UBQLN4Q9NRR5 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.52■□□□□ 0.08
UBQLN4Q9NRR5 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.52■□□□□ 0.08
UBQLN4Q9NRR5 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.52■□□□□ 0.08
UBQLN4Q9NRR5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
UBQLN4Q9NRR5 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UBQLN4Q9NRR5 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.52■□□□□ 0.08
UBQLN4Q9NRR5 AL139011.1-202ENST00000642063 584 ntBASIC15.52■□□□□ 0.08
UBQLN4Q9NRR5 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBQLN4Q9NRR5 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.52■□□□□ 0.07
UBQLN4Q9NRR5 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
UBQLN4Q9NRR5 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
UBQLN4Q9NRR5 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
UBQLN4Q9NRR5 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
UBQLN4Q9NRR5 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBQLN4Q9NRR5 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
UBQLN4Q9NRR5 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBQLN4Q9NRR5 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBQLN4Q9NRR5 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBQLN4Q9NRR5 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBQLN4Q9NRR5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
UBQLN4Q9NRR5 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.52■□□□□ 0.07
UBQLN4Q9NRR5 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms