Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC3Q9BY71 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC3Q9BY71 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC3Q9BY71 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC3Q9BY71 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC3Q9BY71 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 CNN2P2-201ENST00000443536 909 ntBASIC17.55■□□□□ 0.4
LRRC3Q9BY71 CNN2P3-201ENST00000450201 906 ntBASIC17.55■□□□□ 0.4
LRRC3Q9BY71 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 IGHV3-62-201ENST00000520057 340 ntBASIC17.55■□□□□ 0.4
LRRC3Q9BY71 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 AL136317.3-201ENST00000618497 906 ntBASIC17.55■□□□□ 0.4
LRRC3Q9BY71 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 AC008267.7-201ENST00000624570 1194 ntBASIC17.55■□□□□ 0.4
LRRC3Q9BY71 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3Q9BY71 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC3Q9BY71 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.54■□□□□ 0.4
LRRC3Q9BY71 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC3Q9BY71 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LRRC3Q9BY71 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC3Q9BY71 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LRRC3Q9BY71 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
LRRC3Q9BY71 TUBB3P1-201ENST00000405796 1332 ntBASIC17.54■□□□□ 0.4
LRRC3Q9BY71 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC3Q9BY71 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC3Q9BY71 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC3Q9BY71 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC3Q9BY71 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC3Q9BY71 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC3Q9BY71 UXT-AS1-201ENST00000590504 1525 ntBASIC17.54■□□□□ 0.4
LRRC3Q9BY71 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC3Q9BY71 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC3Q9BY71 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.54■□□□□ 0.4
LRRC3Q9BY71 SLC25A39P2-201ENST00000537614 270 ntBASIC17.54■□□□□ 0.4
LRRC3Q9BY71 AP000842.3-202ENST00000569238 1080 ntBASIC17.54■□□□□ 0.4
LRRC3Q9BY71 CYP2A7P1-201ENST00000595391 815 ntBASIC17.54■□□□□ 0.4
LRRC3Q9BY71 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.54■□□□□ 0.4
LRRC3Q9BY71 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC3Q9BY71 AC016027.1-202ENST00000607927 1699 ntBASIC17.54■□□□□ 0.4
LRRC3Q9BY71 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LRRC3Q9BY71 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LRRC3Q9BY71 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC3Q9BY71 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC3Q9BY71 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC3Q9BY71 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC3Q9BY71 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC3Q9BY71 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC3Q9BY71 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LRRC3Q9BY71 AC008677.1-201ENST00000519230 1561 ntBASIC17.53■□□□□ 0.4
LRRC3Q9BY71 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC3Q9BY71 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC3Q9BY71 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC3Q9BY71 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC3Q9BY71 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC3Q9BY71 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRC3Q9BY71 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC3Q9BY71 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC3Q9BY71 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC3Q9BY71 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRC3Q9BY71 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC3Q9BY71 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRC3Q9BY71 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRC3Q9BY71 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LRRC3Q9BY71 AC055876.3-201ENST00000431496 288 ntBASIC17.53■□□□□ 0.4
LRRC3Q9BY71 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
LRRC3Q9BY71 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.53■□□□□ 0.4
LRRC3Q9BY71 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.53■□□□□ 0.4
LRRC3Q9BY71 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC3Q9BY71 AC027307.2-201ENST00000591252 911 ntBASIC17.53■□□□□ 0.4
LRRC3Q9BY71 AC138649.4-201ENST00000612222 287 ntBASIC17.53■□□□□ 0.4
LRRC3Q9BY71 AP001350.2-201ENST00000625104 1094 ntBASIC17.53■□□□□ 0.4
LRRC3Q9BY71 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
LRRC3Q9BY71 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.53■□□□□ 0.4
LRRC3Q9BY71 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.53■□□□□ 0.4
LRRC3Q9BY71 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms