Protein–RNA interactions for Protein: Q9BX63

BRIP1, Fanconi anemia group J protein, humanhuman

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1Q9BX63 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 AC007613.1-201ENST00000572811 2597 ntBASIC20.73■□□□□ 0.91
BRIP1Q9BX63 AC134043.2-201ENST00000624206 2238 ntBASIC20.73■□□□□ 0.91
BRIP1Q9BX63 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRIP1Q9BX63 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 MTND6P24-201ENST00000440466 518 ntBASIC20.72■□□□□ 0.91
BRIP1Q9BX63 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 SPTSSB-204ENST00000617024 1292 ntBASIC20.72■□□□□ 0.91
BRIP1Q9BX63 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 AC093525.9-201ENST00000624961 1746 ntBASIC20.72■□□□□ 0.91
BRIP1Q9BX63 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
BRIP1Q9BX63 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRIP1Q9BX63 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.71■□□□□ 0.91
BRIP1Q9BX63 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.71■□□□□ 0.91
BRIP1Q9BX63 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BRIP1Q9BX63 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BRIP1Q9BX63 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BRIP1Q9BX63 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRIP1Q9BX63 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
BRIP1Q9BX63 DGCR5-201ENST00000399539 862 ntBASIC20.71■□□□□ 0.91
BRIP1Q9BX63 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
BRIP1Q9BX63 AC022494.1-201ENST00000466044 728 ntBASIC20.71■□□□□ 0.91
BRIP1Q9BX63 ZNF890P-202ENST00000530367 1156 ntBASIC20.71■□□□□ 0.91
BRIP1Q9BX63 HILS1-202ENST00000545329 423 ntBASIC20.71■□□□□ 0.91
BRIP1Q9BX63 BANF1P1-201ENST00000553684 263 ntBASIC20.71■□□□□ 0.91
BRIP1Q9BX63 IGHV3-72-202ENST00000621503 303 ntBASIC20.71■□□□□ 0.91
BRIP1Q9BX63 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
BRIP1Q9BX63 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRIP1Q9BX63 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
BRIP1Q9BX63 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.71■□□□□ 0.91
BRIP1Q9BX63 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRIP1Q9BX63 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRIP1Q9BX63 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRIP1Q9BX63 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
BRIP1Q9BX63 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
BRIP1Q9BX63 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
BRIP1Q9BX63 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.7■□□□□ 0.91
BRIP1Q9BX63 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.7■□□□□ 0.9
BRIP1Q9BX63 BTBD7P1-201ENST00000447253 1453 ntBASIC20.7■□□□□ 0.9
BRIP1Q9BX63 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
BRIP1Q9BX63 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BRIP1Q9BX63 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.7■□□□□ 0.9
BRIP1Q9BX63 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC20.7■□□□□ 0.9
BRIP1Q9BX63 FRMD8P1-201ENST00000440433 1524 ntBASIC20.7■□□□□ 0.9
BRIP1Q9BX63 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRIP1Q9BX63 DFFBP1-201ENST00000433250 979 ntBASIC20.7■□□□□ 0.9
BRIP1Q9BX63 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.7■□□□□ 0.9
BRIP1Q9BX63 AC010336.2-201ENST00000564226 506 ntBASIC20.7■□□□□ 0.9
BRIP1Q9BX63 AC105021.1-202ENST00000570572 669 ntBASIC20.7■□□□□ 0.9
BRIP1Q9BX63 AL133215.2-201ENST00000609242 977 ntBASIC20.7■□□□□ 0.9
BRIP1Q9BX63 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.7■□□□□ 0.9
BRIP1Q9BX63 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRIP1Q9BX63 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC20.7■□□□□ 0.9
BRIP1Q9BX63 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BRIP1Q9BX63 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRIP1Q9BX63 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRIP1Q9BX63 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRIP1Q9BX63 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.7■□□□□ 0.9
BRIP1Q9BX63 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.7■□□□□ 0.9
BRIP1Q9BX63 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRIP1Q9BX63 AC016396.2-201ENST00000562575 1417 ntBASIC20.7■□□□□ 0.9
BRIP1Q9BX63 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
BRIP1Q9BX63 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.69■□□□□ 0.9
BRIP1Q9BX63 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRIP1Q9BX63 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.69■□□□□ 0.9
BRIP1Q9BX63 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms